Gene Information

Name : Psest_3928 (Psest_3928)
Accession : YP_007242032.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4099738 - 4101144 bp
Length : 1407 bp
Strand : +
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I

DNA sequence :
ATGTCGAAGTCGCTTCAACTGATCAAAGATTACGATGTGAAGTGGATTGATCTGCGCTTCACCGATACCAAAGGCAAGCA
GCACCACGTCACCGTTCCGGCTCGTGATGCCCAGGATGAAGACTTCTTCGAGCACGGCAAGATGTTCGACGGTTCTTCCA
TCCATGGCTGGAAAGGCATCGAAGCCTCCGACATGATCCTGATGCCGGTCGACGAAACCGCCGTGCTCGATCCGTTCACC
GAAGAGCCGACCCTGATTCTGGTCTGCGACATCGTCGAGCCGAGCACCATGCAGGGCTACGACCGCGACCCTCGCTCCAT
CGCCAAGCGCGCCGAGGAGTTCCTCAAGACCACCGGCATCGGCGACACCGTATTCGTCGGCCCGGAGCCGGAGTTCTTCA
TCTTCGACCAGGTCAAGTTCAAGTCGGACATCTCCGGCTCGATGTTCAAGATCTACTCCGAGCAAGGCTCCTGGATGACC
GACCAGGACGTCGAAGGCGGCAACAAGGGCCATCGCCCGGCTGTCAAGGGCGGTTACTTCCCGGTTCCGCCGTGCGACCA
CGACCACGAAATCCGTACTGCCATGTGCAACGCCATGGAAGACATGGGTCTGGTCGTCGAAGTGCACCACCACGAAGTGG
CTACCGCCGGTCAGAACGAGATCGGTGTGAAGTTCAACACCCTGGTCGCCAAGGCTGACGAAGTTCAGACCCTGAAGTAC
TGCGTGCACAACGTCGCCGACGCCTATGGCAAGACCGCGACCTTCATGCCGAAGCCGCTGTATGGCGACAACGGTTCGGG
TATGCACGTACACATGTCCATCTCCAAGGATGGCAAGAACACCTTCGCTGGCGAAGGCTATGCCGGCCTGTCCGAAACCG
CCCTGTACTTCATCGGCGGCATCATCAAGCACGGCAAGGCCCTGAACGGCTTCACCAACCCGGCAACCAACTCCTACAAG
CGTCTGGTCCCGGGCTTCGAAGCACCGGTCATGCTGGCCTACTCGGCCCGCAACCGTTCCGCCTCGATCCGTATTCCGTA
CGTTTCCAGCCCGAAAGCCCGTCGTATCGAAGCGCGCTTCCCGGACCCGGCTGCCAACCCGTACCTGTGCTTCGCTGCAC
TGCTGATGGCTGGCCTGGACGGTATCCAGAACAAGATCCACCCTGGCGATGCGGCCGACAAGAACCTGTACGATCTGCCG
CCGGAAGAAGGCAAGCTGATCCCGCAGGTGTGCGGCAGCCTGAAGGAAGCCCTGGAAGAGCTGGACAAGGGCCGCGCGTT
CCTGACCAAGGGCGGCGTGTTCTCCGACGAGTTCATCGATGCCTACATCGAGCTGAAGTCCGAGGAAGAGATCAAGGTGC
GCACCTTCGTGCACCCGCTGGAATACGACCTGTACTACAGCGTCTGA

Protein sequence :
MSKSLQLIKDYDVKWIDLRFTDTKGKQHHVTVPARDAQDEDFFEHGKMFDGSSIHGWKGIEASDMILMPVDETAVLDPFT
EEPTLILVCDIVEPSTMQGYDRDPRSIAKRAEEFLKTTGIGDTVFVGPEPEFFIFDQVKFKSDISGSMFKIYSEQGSWMT
DQDVEGGNKGHRPAVKGGYFPVPPCDHDHEIRTAMCNAMEDMGLVVEVHHHEVATAGQNEIGVKFNTLVAKADEVQTLKY
CVHNVADAYGKTATFMPKPLYGDNGSGMHVHMSISKDGKNTFAGEGYAGLSETALYFIGGIIKHGKALNGFTNPATNSYK
RLVPGFEAPVMLAYSARNRSASIRIPYVSSPKARRIEARFPDPAANPYLCFAALLMAGLDGIQNKIHPGDAADKNLYDLP
PEEGKLIPQVCGSLKEALEELDKGRAFLTKGGVFSDEFIDAYIELKSEEEIKVRTFVHPLEYDLYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-98 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3928 YP_007242032.1 glutamine synthetase, type I VFG1399 Protein 2e-98 49