Gene Information

Name : Psest_3911 (Psest_3911)
Accession : YP_007242016.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4079714 - 4081102 bp
Length : 1389 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain

DNA sequence :
ATGACTGAAGTGACGCAGGAGCGGGTGCTGCTGGTCGAAGACGATGACAGTCTGCGCCAGTTGCTGGTCGAGGAGCTGGA
AGACCGCGGCTTGCAAGTGCGTGCGCTGGCCAGCGCGGAGGAGGCGGTGGGTTCGCTGGAAAGCTGGGAGCCGGCGCTGG
TGGTCAGCGACCTGCGCCTGCCCGGTGCCGATGGCATGGCGCTGCTGCGGCGGGTGAAGAGCATGCAGGCGGCACCGGCG
TTTCTGGTGATCACCGCGTTCGGCAGCATCCAGCAGGCGGTGGCGGCGCTTAAGGAGGGCGCCGACGAGTTCCTTACCAA
GCCGCTGGACCTCGAACATTTTGGCCTGGCGGTGGCCCGCGCGCTGGAGACGCGACGCTTGCGCGACGAGGTGCGGCGCT
TCCAGCAGCTGCTCAGCGACGATCGCTTCCACGGCATGCTCGGCCGCAGCCGGGTGATGCGCGGCTTGTTCGACCAGATC
CGCCAGCTCGCCCGTGCCGAAGGGCCGGTGCTGGTGATTGGCGAGAGCGGCACCGGCAAGGAACTCGTCGCCCGTGCCGT
ACACGCGGAAAGTGAACGTGCGAACCGGCCGTTTCTGGCAATCAACTGCGCCGGGCTGCCGGCCGAATTGCTGGAAAGCG
AGTTCTTCGGCCATGTCGCCGGCGCCTTTACTGGTGCCAACCGCGCGCACAAGGGGCTGTTCCAGCAGGCCGACGGCGGC
ACGCTGTTCCTCGACGAGATCGGCGAGATGCCGCTGCCGCTGCAGGCCAAACTCCTGCGTGTGCTGCAGGAAGGCACGAT
CCGCCCGGTGGGTGCCGAACGTGAGCTGACCGTGGACGTACGCATCATCGCCGCCAGCAACCGCCCGTTGGAAACCGAGG
CCGGTCGTGAGGCCTTCCGCGAGGACCTGTTCTTCCGTCTGGAGACCTTCATCCTGCAGGTGCCGCCGCTGCGGGATCGG
GAGGAGGACCTCGAGCTGCTCGCGGCCGGTTTCGTCGCCCATTTCGCCGCGCGCAGCGGGCGGCCGGTGCGCGGCCTGGC
ACCGGCGGTGCTGGCGCAACTGCGGCGCTATCCCTTCCCCGGCAACGTGCGCGAACTGCAAAACGCCATCGAGCGCGCGG
TGACCTTCTGCCACGGGCGCAGCATCGAGCTGGAGCACCTGCCCAGCCGCATTGCCGACTATCGTGACGACAACGCCCGC
AGTGCCGGCGCCGAACTGCTTGCCCAGCTTAGCGATGGCCCGCTGCTGCCGACCCTGGAAGAGCTGGAACTGCGCTATAT
CGAGCATGTGCTGAAGCTGGTGGACGGCAACAAGCGCCGCGCGGCGGCCTTGCTCGGCATCGGCCGGCGCACGCTGTACC
GCCGCCTCGGCGAGCGCGAGGACGGTTGA

Protein sequence :
MTEVTQERVLLVEDDDSLRQLLVEELEDRGLQVRALASAEEAVGSLESWEPALVVSDLRLPGADGMALLRRVKSMQAAPA
FLVITAFGSIQQAVAALKEGADEFLTKPLDLEHFGLAVARALETRRLRDEVRRFQQLLSDDRFHGMLGRSRVMRGLFDQI
RQLARAEGPVLVIGESGTGKELVARAVHAESERANRPFLAINCAGLPAELLESEFFGHVAGAFTGANRAHKGLFQQADGG
TLFLDEIGEMPLPLQAKLLRVLQEGTIRPVGAERELTVDVRIIAASNRPLETEAGREAFREDLFFRLETFILQVPPLRDR
EEDLELLAAGFVAHFAARSGRPVRGLAPAVLAQLRRYPFPGNVRELQNAIERAVTFCHGRSIELEHLPSRIADYRDDNAR
SAGAELLAQLSDGPLLPTLEELELRYIEHVLKLVDGNKRRAAALLGIGRRTLYRRLGEREDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 3e-59 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 3e-59 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3911 YP_007242016.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0089 Protein 2e-74 44
Psest_3911 YP_007242016.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0467 Protein 2e-66 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3911 YP_007242016.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1214 Protein 2e-71 43
Psest_3911 YP_007242016.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG0116 Protein 2e-60 42
Psest_3911 YP_007242016.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1249 Protein 2e-54 42