Gene Information

Name : Psest_3883 (Psest_3883)
Accession : YP_007241988.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4053204 - 4053881 bp
Length : 678 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAAAGTGCTGGTGGTGGAAGACGAGGCGCTGCTGCGCCACCACTTGCTGACGCGGCTCGGTGAAAGCGGGCATATCGT
CGATGCCGTGCCCAACGCCGAAGAAGCGCTGTATCAGACCCACGAATTCAATCACGACCTTGCCGTCATCGATCTCGGCC
TGCCAGGTATCAGCGGGCTGGACCTGATCCGCCAGCTGCGCAGCCGCGGCAAGGTCTTCCCCATTCTTATCCTCACCGCC
CGCGGCAACTGGCAGGACAAGGTCGAAGGCCTGGCCGCCGGCGCCGACGACTATGTGGTCAAGCCGTTCCAGTTCGAGGA
ATTGGAAGCCCGGCTGAACGCGCTGCTGCGCCGCTCCAGCGGCTTCACCCAGGCCACCATCGAAGCCGGCCCGCTGCTGC
TTGATCTCAATCGCAAGCAGGCCATGGCCAATGGCGAGCCGCTGGCGCTGACCGCTTATGAATATCGCATTCTCGAATAC
CTGATGCGTCATCAGCAGCAGGTGGTGGCCAAGGAGCGGTTGATGGAGCAGCTCTACAGCGGCGACGAGGAGCGCGATCC
GAACGTGATCGAGGTACTCGTCGGGCGGCTGCGGCGCAAGCTCGAAGCGCAGTGCGCGATGAAGCCCATCGAAACCGTGC
GCGGGCTCGGCTATCTGTTCACCGAGCGCTGCCGATGA

Protein sequence : 
MKVLVVEDEALLRHHLLTRLGESGHIVDAVPNAEEALYQTHEFNHDLAVIDLGLPGISGLDLIRQLRSRGKVFPILILTA
RGNWQDKVEGLAAGADDYVVKPFQFEELEARLNALLRRSSGFTQATIEAGPLLLDLNRKQAMANGEPLALTAYEYRILEY
LMRHQQQVVAKERLMEQLYSGDEERDPNVIEVLVGRLRRKLEAQCAMKPIETVRGLGYLFTERCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002516.2.879194.p Protein 6e-83 86
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene2526. Protein 4e-48 54
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene1136. Protein 3e-48 54
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene1939. Protein 5e-49 54
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0530 Protein 3e-48 54
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.913289.p Protein 4e-47 53
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2022. Protein 1e-48 53
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1005. Protein 1e-47 49
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 5e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3883 YP_007241988.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0475 Protein 5e-49 54