Gene Information

Name : Psest_3748 (Psest_3748)
Accession : YP_007241854.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 3918862 - 3919800 bp
Length : 939 bp
Strand : -
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence : 
ATGTCTCGCGAAATTCGCATCGCCACCCGCAAGAGTGCCCTGGCCCTGTGGCAGGCCGAATACGTCAAGGCGCGCCTGGA
AGCGTCGCACCCGGGGCTGAAGGTCACCTTGGTGCCGATGGTCAGCCGCGGCGACAAGCTACTCGACGCGCCCCTGGCGA
AAATTGGCGGCAAAGGCCTGTTCGTCAAGGAGCTGGAAACGGCGCTGATGGAGAACGAAGCGGACATCGCCGTGCACTCC
ATGAAGGATGTGCCGATGGAGTTTCCCGAAGGGCTGGGCCTGTACTGCATCTGCGAGCGCGAAGACCCACGCGACGCCTT
CGTCTCCAATCACTACGACGACCTCGATGCGCTGCCGCCCGGCAGCGTGGTCGGCACCTCGTCGCTGCGCCGCCAGGCCC
AACTGCTGGCGCGTCGGCCGGACCTGAAAATCCAGTTCCTGCGCGGTAACGTCAATACCCGACTGGCCAAGCTCGATGCC
GGCGAGTACGACGCCATCATCCTCGCCGCCGCCGGGCTGATCCGCCTTGGCTTCGGCGAGCGCATCCGCTCCAGTATCAG
CGTCGATGAGAGCCTGCCGGCCGGCGGTCAGGGTGCGGTCGGCATCGAGTGCCGCACCGGCGACAGCGAGCTGCATGCGC
TGTTGGAGTGCCTGAACCATCCGCAGACTGCTACCCGCGTCGTCGCCGAGCGTGCCTTGAACAAGCGCTTGAACGGCGGC
TGCCAGGTGCCGATTGCCTGTTACGCGGTGCTCGAAGGCGAGCAGCTGTGGCTGCGCGGGCTGGTCGGGCAGCCGGACGG
CACTCTGCTGCTGCGCGCCGAGGGGCGTGCGCCGGCCGCCGACGCCGAGGCATTGGGTGTGCGTGTTGCCGAACAGTTGC
TGGACCAGGGCGCTGAGCAGATCCTCCAGGCGGTTTACGGTGAGGCTGGCCACGAGTGA

Protein sequence : 
MSREIRIATRKSALALWQAEYVKARLEASHPGLKVTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALMENEADIAVHS
MKDVPMEFPEGLGLYCICEREDPRDAFVSNHYDDLDALPPGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDA
GEYDAIILAAAGLIRLGFGERIRSSISVDESLPAGGQGAVGIECRTGDSELHALLECLNHPQTATRVVAERALNKRLNGG
CQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAADAEALGVRVAEQLLDQGAEQILQAVYGEAGHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-66 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-66 61