Gene Information

Name : Psest_3533 (Psest_3533)
Accession : YP_007241652.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3711851 - 3712516 bp
Length : 666 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGCGTCTGCTCTTGGTCGAAGACAACGTTCCGCTGGCCGACGAACTGGTCGCCAGTCTCAGCCGCAACGGCTATGCGAT
CGACTGGCTCACCGATGGCCGCGATGCCGAATACCAGGGCTCAAGCGAGCCCTACGACCTGATCATTCTCGACCTCGGCT
TGCCTGGCAAACCGGGGCTGGAGGTGCTGCGGGCCTGGCGCGCCGGCGGCCTCACCACACCGGTGCTGATCCTCACCGCG
CGCGGCTCCTGGGCCGAGCGCATCGATGGCCTCAAGGCCGGCGCCGATGACTACCTGACCAAGCCCTTCCACCCCGAAGA
ACTGCTGCTGCGCATCCAGGCACTGTTGCGCCGTGCCCACGGCCTGGCCAACCAGCCCATGCTGCAGGCCGGTGGTCTGG
AGCTGGACGAATCGCGCCAGTGCTGCCGCAAGGACGGCGAGGACATTGAACTCACCGCCGGTGAGTTCCGCCTGCTGCGC
TATTTCATGCTGCACCCTGGCCAGCTGCTCTCCAAGTCACAACTGACCGAACATCTCTACGACGGAGAAACCGAACGCGA
CTCCAATGTCATCGAGGTGCACATCAACCGGCTGCGCGGCAAGCTCGGCCGCGAGCTGATCGAAACGCGCCGCGGTCAGG
GCTATCGCTTCGGCGGCCAGGTGTGA

Protein sequence :
MRLLLVEDNVPLADELVASLSRNGYAIDWLTDGRDAEYQGSSEPYDLIILDLGLPGKPGLEVLRAWRAGGLTTPVLILTA
RGSWAERIDGLKAGADDYLTKPFHPEELLLRIQALLRRAHGLANQPMLQAGGLELDESRQCCRKDGEDIELTAGEFRLLR
YFMLHPGQLLSKSQLTEHLYDGETERDSNVIEVHINRLRGKLGRELIETRRGQGYRFGGQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002516.2.879194.p Protein 2e-36 46
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 7e-30 44
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1005. Protein 5e-34 43
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 2e-24 42
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2022. Protein 2e-30 41
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.913289.p Protein 3e-29 41
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene1136. Protein 5e-30 41
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene2526. Protein 2e-30 41
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene1939. Protein 2e-31 41
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 4e-26 41
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 4e-27 41
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0530 Protein 4e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0475 Protein 2e-31 41
Psest_3533 YP_007241652.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 9e-30 41