Gene Information

Name : Psest_3465 (Psest_3465)
Accession : YP_007241584.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3635397 - 3636080 bp
Length : 684 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGCATCCTGGTCATCGAAGACAACCGCGACATCCTGGCGAACGTGCTGGATTACCTCGAACTCAAGGGCTACGTGGT
GGATTGCGCCCAGGACGGCCTCAGCGGCCTGCACCTGGCCGCGACCGAGCACTACGACCTGATCGTGCTGGACATCATGC
TGCCCGGCATCGACGGGCTGCAGGTGTGCAAGCGGCTGCGCGAGGACGCCGGGCGCGACACTCCGATCATCATGCTCACC
GCCCGCGACGCGCTGGCCGACCGACTGCAAGGGCTGGGCGCTGGTGCCGACGATTATCTGGTCAAGCCGTTCGCGCTGTC
CGAGCTGGTCGCCCGTATCGAGGCCGTGCTACGTCGTAGCCAGGGTTCGCGCAAGAACAAGCTGCAGGTCGGTGACCTGC
AGTATGACCTCGACACCCTGCAGGCAACCCGTGCCGGGCAGCCGCTGCGGTTGAACCCGATTGGCCACAAGCTGCTGGCG
ATCCTGATGCAGAAGAGCCCGGCGGTGGTGCGCCGCGAGCAGCTGGAGGAGGCGCTGTGGGGCAACGATGTGCCTGACAG
CGACAGCCTGCGCAGCCATATCCACCAGCTGCGTCAGGTGCTCGACAAACCGTTCGCGACACCGCTGCTGCACACCGTGC
ACGGCGTCGGGTTTCGCCTCGCGGAGAGCGAGCATGCTGGCTAA

Protein sequence : 
MRILVIEDNRDILANVLDYLELKGYVVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGLQVCKRLREDAGRDTPIIMLT
ARDALADRLQGLGAGADDYLVKPFALSELVARIEAVLRRSQGSRKNKLQVGDLQYDLDTLQATRAGQPLRLNPIGHKLLA
ILMQKSPAVVRREQLEEALWGNDVPDSDSLRSHIHQLRQVLDKPFATPLLHTVHGVGFRLAESEHAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-38 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3465 YP_007241584.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 4e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3465 YP_007241584.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 9e-39 43
Psest_3465 YP_007241584.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-28 43
Psest_3465 YP_007241584.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 2e-32 41