Gene Information

Name : Psest_3341 (Psest_3341)
Accession : YP_007241461.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : outer membrane receptor for ferrienterochelin and colicins
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3505656 - 3507887 bp
Length : 2232 bp
Strand : +
Note : PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor

DNA sequence :
ATGTCTATCCCCTTCTCACGTACCGCCCTGTCCTGCGCCATGATCGGCTGCAGCTGGACGGCCCTCGCCCAGAACGCGCC
TGTCACGCTCAACGACACGGTCGTCAGCGCCTCCGGCTTCGAACAGAAGATCACCGAAGCGCCGGCGAGCATCAGCGTCA
TCAGCCGTGAAGACCTGCAGCAGAAGCGCTATAGCAATCTGGCGCAGGCGTTGGACGACGTGGAAGGCATCGATATCCGC
CAGGGCACAGGCAAGACCGGCGGGCTGAATATCAGCATCCGCGGCATGCCCAGCGACTACACATTGATCTTGATTGATGG
GCGCCGGCAGAACACTGCCGGTAACGTCACCCCTAACGGGTTCAACGAAACGTCCACCAGCTTTATGCCCCCGATGTCGG
CCATCGAGCGCATCGAAGTGATCCGCGGCCCAATGTCGACCCTATACGGTTCGGATGCGATGGGCGGTGTGGTCAATATC
ATTACCAAGAAAGTGGCGAACGAATGGGGCGGGTCGGTCAGCCTCGACCACACTTTCCAAGAGAATCGCGATTACGGTGA
CACCAGCAATACCAGCCTATATGCCAGTGGCCCTCTCATCGATAACTTGCTCGGGCTTGCTGTTCGGGGCAGCCTGTATG
ACCGCGCCGAATCTGATTTATCTTTTGACAATGACAGCCCTGTTAGCAAACGTGGGGCCTCACCTGTCGAGGGACGCAAC
CATGTGCTCGGCGCCCGTCTAACGCTTACCCCTGACGAAGCACATGACATCTCCCTGGATTTCGAGCGTGGCCGTCAGGT
CTACAACAACGACGACTGCCAGCTAGGAAACCTCGACGGTAAGAACGGCGGCAGCGCCAACGATGGCTGCACCGCAGACG
CACCGACCAAAGCCAACGGATATGCTGACGAACTGCGCTTCGAACGCGACCAGTTTGCTCTTAGCCATACCGGGCGCTTC
AGTTTCGGCACGCTGGATAGCAGCCTAACGCACAACACCACCGAAACCATCGGGCGTACGATTCCTGGAACGCCCATCGG
CAACTCCTACACCGGCTACCCTTCGATCGTCATCGGCGATGACCGCGAGCTGAAATCCACCGATCTGATCCTCGACACCA
AACTGGTCAGCCCGGTTGGCGAATCGCACATCCTTACCGTTGGGGGCCAGTACTGGGACGCCAAGGTCACGGACGGCATT
GCCGACGACGACTTTCAGCAGAAATCATGGGCGATGTTCGTCGAAGACGAGTGGCGTCTACGCCACGACCTGGCTTTGAC
GCTGGGTGCTCGCTATGAAGACCATGAAGCATTCGGTGGCCACATCAGCCCACGCGCTTATCTGGTCTGGAATACAAATG
ACAATTGGACGATGAAAGGTGGCGTGAGCCGCGGATACAAAACGCCCACGCTTAACCAGCTTCACGACGGCATCAGTGGT
GTCACCAGTCAAGGCGCGGTCATCACGGTTGGCAGCCCGGACCTAGATCCGGAAGTCACTACCAATACCGAATTCGGCGT
CTACTTCGATAACCTCAGCGGCTTCAGCGCGAACGCGACCGTGTTCCATAACAAGTTCGACGACAAGATCGATGATGGAA
CGCCGATCGCGAACTGTTTCTCTGCAACAAATCCGAACCAGCCTGGCTGCGTCAGCTTCGGTAGCGGTTTCACGCAAGAC
TCCTTCGCCCAAAGTGTGAACATCGACGAAGCCGTTACCCAAGGTCTTGAACTGGCGGGGCGCTGGGAGTTCGCCCCGGC
TTGGGCACTGGCTATGAATTACACCTACACCGATAGCGAACAAAAGAGTGGCGCAAACAAAGGCGCCCCTCTGACCAACA
CTCCAGAACACATGCTTCATGCACGCATCAGCTGGCAGACCACAGACCGGCTGAACCTGTGGTTCAAGGGTGAGTACCGA
GGCGAGCGAACGCGCTTCACCGATCGCTATGAAAACCTGACCGCAGCAAATCAGGCACTTTATGACGCTGCGGGCGATTT
GAAAGCGTACGAAGTCTTCCACCTCGGCGGTTCATTTAAAGCCTCGGAAAGCGTCACCCTCAACGCAACCATCTACAACC
TCTTCGACAAGGACTTTACCGAGGGCACTTACTACACCACCAACACTGGAACGTCGGGTTGGGCCTCCGATTACATCCAG
TCGGCAGCTGCGACTAGCGGTACGCTGGAAGAAGGCCGCCGCCTGTGGCTATCCGCCAACTTCACCTTCTAA

Protein sequence :
MSIPFSRTALSCAMIGCSWTALAQNAPVTLNDTVVSASGFEQKITEAPASISVISREDLQQKRYSNLAQALDDVEGIDIR
QGTGKTGGLNISIRGMPSDYTLILIDGRRQNTAGNVTPNGFNETSTSFMPPMSAIERIEVIRGPMSTLYGSDAMGGVVNI
ITKKVANEWGGSVSLDHTFQENRDYGDTSNTSLYASGPLIDNLLGLAVRGSLYDRAESDLSFDNDSPVSKRGASPVEGRN
HVLGARLTLTPDEAHDISLDFERGRQVYNNDDCQLGNLDGKNGGSANDGCTADAPTKANGYADELRFERDQFALSHTGRF
SFGTLDSSLTHNTTETIGRTIPGTPIGNSYTGYPSIVIGDDRELKSTDLILDTKLVSPVGESHILTVGGQYWDAKVTDGI
ADDDFQQKSWAMFVEDEWRLRHDLALTLGARYEDHEAFGGHISPRAYLVWNTNDNWTMKGGVSRGYKTPTLNQLHDGISG
VTSQGAVITVGSPDLDPEVTTNTEFGVYFDNLSGFSANATVFHNKFDDKIDDGTPIANCFSATNPNQPGCVSFGSGFTQD
SFAQSVNIDEAVTQGLELAGRWEFAPAWALAMNYTYTDSEQKSGANKGAPLTNTPEHMLHARISWQTTDRLNLWFKGEYR
GERTRFTDRYENLTAANQALYDAAGDLKAYEVFHLGGSFKASESVTLNATIYNLFDKDFTEGTYYTTNTGTSGWASDYIQ
SAAATSGTLEEGRRLWLSANFTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r4 AAC61730.1 exogenous ferric siderophore receptor R4 Not tested PAI I CFT073 Protein 2e-132 45
unnamed CAC39288.1 hypothetical protein Not tested LPA Protein 3e-136 45
Z1617 NP_287121.1 bifunctional enterobactin receptor/adhesin protein Not tested TAI Protein 1e-133 44
iha AAF36432.2 adhesin Virulence TAI Protein 1e-133 44
c3610 NP_755485.1 bifunctional enterobactin receptor/adhesin protein Not tested PAI I CFT073 Protein 2e-133 44
ECUMN_3356 YP_002414032.1 bifunctional enterobactin receptor/adhesin protein Virulence Not named Protein 2e-133 44
Z1178 NP_286713.1 bifunctional enterobactin receptor/adhesin protein Virulence TAI Protein 1e-133 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3341 YP_007241461.1 outer membrane receptor for ferrienterochelin and colicins VFG1731 Protein 1e-133 44