|
Name : Psest_0328 (Psest_0328) Accession : YP_007238569.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 350894 - 352891 bp Length : 1998 bp Strand : + Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast DNA sequence : ATGCCCAGCCGTCGTGAGCGAGCCAATGCCATCCGCGCCCTCAGCATGGATGCTGTGCAGAAAGCCAACAGCGGCCACCC GGGTGCCCCCATGGGCATGGCGGACATCGCCGAAGTGCTCTGGCGTGATCATCTGAAGCACAGCCCGACCAACCCGCAGT GGGCCGACCGCGACCGCTTCGTGCTGTCCAACGGCCACGGCTCGATGCTGATCTACTCGCTGCTGCACCTGACCGGCTAC GACCTGTCCATCGATGACCTGAAGAACTTCCGCCAGCTGCACAGCAAGACCCCGGGCCACCCGGAGTTCGGCTACACCGC CGGCGTCGAGACCACCACCGGCCCGCTGGGCCAGGGCCTGGCCAACGCCGTCGGCTTCGCCGTGGCCGAGAAGGTCATGG CGGCGCAATTCAACCGCCCCGGCCACAACATCGTCGACCACAACACCTACGTGTTCCTCGGTGACGGCTGCATGATGGAA GGCATCAGCCACGAAGTCTGCTCGCTGGCCGGCACCCTTGGCCTGAACAAGCTGATCGCCTTCTACGACGACAACGGCAT CTCCATCGACGGCGAAGTCCACGGCTGGTTCACCGACGATACCCCGCGCCGCTTCGAGGCTTATGGCTGGCAGGTGATCC GCAACGTCGACGGCCATGATGCCGACGAAATCCAGATGGCCATCGAGACCGCGCGCAAGAGCGACCGGCCGACGCTGATC TGCTGCAAGACCATCATCGGCTTCGGTTCGCCGAACAAGCAGGGCAAGGAAGAGTCCCACGGCGCTGCTTTGGGCGACGC CGAGATCGCCCTGACCCGCGAAGCGCTGGGCTGGAAATATGGTCCGTTCGAAATCCCGGCCGAGATCTACGCCGAGTGGG ACGCCAAGCAGAAGGGCGCCGAAGCCGAGAACGAGTGGAACAAGCGCTTCGCCGCCTATGAGGCCGAATTCCCGGCCCTG GCGTCCGAGTTCAAGCGGCGCATGGCCGGCGAGCTGCCGGCCGACTTTGCCGAAAAGGCCAGCGAGTTCATCCGTGAAGT CGCCAACAAGGGCGAAACCATTGCCAGCCGCAAGGCCAGCCAGAACTGCCTGAATGCCTTCGGCCCGCTGCTGCCGGAAC TGCTCGGCGGCTCGGCGGATCTCGCCGGTTCCAACCTGACCCTGTGGAAAGGCTGCAAGCCGGTGGTGGCCGAGGATGCC TCGGGCAACTACATGTATTACGGCGTGCGTGAGTTCGGCATGGCCGCGATCATGAACGGCGTCGCCCTGCACGGCGGCCT GATCCCGTACGGCGCGACCTTCCTGATGTTCATGGAATATGCGCGCAACGCCGTGCGCATGTCCGCGCTGATGAAGCAGC GGGTGCTCTACGTCTTCACCCACGACTCCATCGGTCTTGGCGAAGACGGCCCGACCCACCAGCCGATCGAACAGCTGACC AGCCTGCGCACCACGCCGAACCTGGACACCTGGCGCCCGGCCGACACCGTCGAATCGGCGGTGGCCTGGAAGCATGCGCT TGAGCGCAAGGACGGCCCGAGCGCGCTGATCTTCTCGCGCCAGAACCTGCCGTTCCATGTGCGTGACAACGAAACCGAAG CGGCCATTGCCCGCGGTGGCTACATCCTGAAGAACTGCGCCGGCGAGCCGGAGTTGATCCTGATCGCCACCGGTTCGGAA GTCAGCCTGGCAGTGCAGGCCGCCGACAAGCTGACCGAGCAGGGTCGCAAGGTGCGTGTCGTCTCGATGCCATGCACCAG CGTGTTCGACAGCCAGGATGCCGCCTGGAAACAGCACGTGCTGCCGGTGGAAGTCGGCGCGCGCATCGCCATCGAGGCGG CGCACGCGGACTACTGGTACAAGTACGTCGGCCTCGACGGTCGCATCATCGGCATGACCACTTACGGCGAATCGGCTCCG GCCAACCAGCTGTTCGAGGAGTTCGGCTTCACCGTCGACAACATCCTCGGCATCGCCGAAGAGCTGCTGGAGGACTGA Protein sequence : MPSRRERANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWRDHLKHSPTNPQWADRDRFVLSNGHGSMLIYSLLHLTGY DLSIDDLKNFRQLHSKTPGHPEFGYTAGVETTTGPLGQGLANAVGFAVAEKVMAAQFNRPGHNIVDHNTYVFLGDGCMME GISHEVCSLAGTLGLNKLIAFYDDNGISIDGEVHGWFTDDTPRRFEAYGWQVIRNVDGHDADEIQMAIETARKSDRPTLI CCKTIIGFGSPNKQGKEESHGAALGDAEIALTREALGWKYGPFEIPAEIYAEWDAKQKGAEAENEWNKRFAAYEAEFPAL ASEFKRRMAGELPADFAEKASEFIREVANKGETIASRKASQNCLNAFGPLLPELLGGSADLAGSNLTLWKGCKPVVAEDA SGNYMYYGVREFGMAAIMNGVALHGGLIPYGATFLMFMEYARNAVRMSALMKQRVLYVFTHDSIGLGEDGPTHQPIEQLT SLRTTPNLDTWRPADTVESAVAWKHALERKDGPSALIFSRQNLPFHVRDNETEAAIARGGYILKNCAGEPELILIATGSE VSLAVQAADKLTEQGRKVRVVSMPCTSVFDSQDAAWKQHVLPVEVGARIAIEAAHADYWYKYVGLDGRIIGMTTYGESAP ANQLFEEFGFTVDNILGIAEELLED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 72 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 65 |
