Gene Information

Name : Psest_3156 (Psest_3156)
Accession : YP_007241281.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3325614 - 3326156 bp
Length : 543 bp
Strand : +
Note : PFAM: Resolvase, N terminal domain

DNA sequence :
ATGGCAACGGTCGGTTATGTTCGAGTTAGCACGGTGGACCAGAATACAGAGCGCCAGCTTGACGGCCTCACCCTGGACAA
GGTGTTTGAAGACAAATGCAGCGGTAAGGATGCCCACCGCCCTGCCCTGCAAGCGCTCATCGAATACGTGCGTGAAGGTG
ACACCGTAGTCGTTCACGACATCAGCCGTATGGCTCGTAACCTCGAAGACCTGTTGAGCCTCGTTAAAGCCTTCAACAAG
CGTGGCGTAGCGGTACGATTCAACAAAGAAGGACTGAGCTTCACAGGTGAAGCCAATCCCATGCAGGAACTCATGCTTTC
TATGCTGGGTGCTGTGTATCAATTCGAACGCTCGATGATGCTGGAGCGTCAGCGGGAAGGCATTCAGCAAGCCAAGCAGG
CAGGCAAATACAGAGGCGGCAGACCTCGTGTCGATGCAGAGGCAATCAAGGCCGCTCTAGATTCTGGCCTATCAATTCGT
AAGGCAGCAGAAGCGCTTGGAGTCGGTATCAGCACTGTCCAGCGAGTGAAGGCCACAGCCTGA

Protein sequence :
MATVGYVRVSTVDQNTERQLDGLTLDKVFEDKCSGKDAHRPALQALIEYVREGDTVVVHDISRMARNLEDLLSLVKAFNK
RGVAVRFNKEGLSFTGEANPMQELMLSMLGAVYQFERSMMLERQREGIQQAKQAGKYRGGRPRVDAEAIKAALDSGLSIR
KAAEALGVGISTVQRVKATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 2e-38 57
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 7e-38 51
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 7e-38 51
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-37 51
res YP_005124341.1 DNA-invertase Not tested Not named Protein 5e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_3156 YP_007241281.1 site-specific recombinase, DNA invertase Pin VFG1030 Protein 3e-38 51