Gene Information

Name : Psest_3129 (Psest_3129)
Accession : YP_007241255.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3305804 - 3306700 bp
Length : 897 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD

DNA sequence :
ATGCCTGCACTCGACGATTCCGTTATCGACCGCTACCTCGATGCCCTATGGCTGGAAAAAGGACTGGCCGATAATAGCCG
TGAGGCCTATCGCAGTGACCTTGCGCTGTTCAATGGTTGGTTGAGCGAGCGGGGTGTCCGGCTTGCCGTCGCTGGTCGCG
AGATCATTCTCGACCATCTCGCATGGCGCCTGAACAACGGATACAAGGCGCGCTCCACCGCACGGTTCCTCTCCGGTTTG
CGCGGCTTCTATCGTTACCTGCTGCGCGAAGGCGAAATCGCTGTCGACCCGACCTTGCGTGTGGACCTGCCTCGGCTCGG
TCGCCCCTTGCCCAAGGCGCTGTCCGAGGCCGATGTCGAGGCGCTGCTGGCTGCGCCGGATCTTGGCGACCCGATTGGGT
TGCGTGATCGAGCCATGCTCGAGGTGCTCTACGCCTGTGGTTTGCGCGTGACAGAGCTGATCAGCCTGACGCTGGAGCAG
GTCAGCATGCGGCAGGGTGTGTTACGCACCTTCGGGAAGGGCAACAAGGAACGGTTGGTGCCGCTGGGGGATGAAGCCTT
GCACTGGCTGGAGCGTTATCAGCGCGAGGGGCGGGACGAGTTGCTTGGTGGAAAGGCCCGCGATGTGCTGTTCCCCAGCC
TGCGTGGCGACCAGATGACGCGTCAGACCTTCTGGCATCGAATCAAGCTGCACGCCAAGGTTGCGGGTATCGCTACGTCG
ATATCGCCGCATACCTTGCGCCACGCCTTCGCCACGCATCTGCTCAACCACGGCGCGGATCTGCGCACCGTGCAGATGCT
GCTTGGTCATAGTGATCTCTCGACCACTCAGATTTACACCCACATCGCCCGTGCGCGCCTGCAGGAGCTGCATGCGCAGC
ATCATCCGCGCGGGTAG

Protein sequence :
MPALDDSVIDRYLDALWLEKGLADNSREAYRSDLALFNGWLSERGVRLAVAGREIILDHLAWRLNNGYKARSTARFLSGL
RGFYRYLLREGEIAVDPTLRVDLPRLGRPLPKALSEADVEALLAAPDLGDPIGLRDRAMLEVLYACGLRVTELISLTLEQ
VSMRQGVLRTFGKGNKERLVPLGDEALHWLERYQREGRDELLGGKARDVLFPSLRGDQMTRQTFWHRIKLHAKVAGIATS
ISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQELHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-61 60
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-61 60