Gene Information

Name : Psest_2938 (Psest_2938)
Accession : YP_007241071.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3135698 - 3137353 bp
Length : 1656 bp
Strand : -
Note : PFAM: Sodium:solute symporter family; TIGRFAM: cation/acetate symporter ActP; transporter, SSS family

DNA sequence :
ATGATCCTGCGTTTTCTGATGACTGCCCTGCTGTTGGCAGTCTCGCCTGCACTGCTCGCCGACGCCATTACCGGCGAGGT
CGAGAAGCAGGCCACCAACTACACCGCCATCATCATGTTCGTGGTGTTCATCGCCTTCACCATGGGTATCACCAAGTGGG
CGGCCAAGCGCAACACCTCCACGGCTGATTACTACACCGCGGGTGGCAGCATCACCGGCTTCCAGAATGGCCTGGCGATT
GCCGGTGACTTCATGTCGGCAGCGTCCTTCCTCGGCATTTCCGCGCTGGTCTACACCAGCGGCTATGACGGTCTGATCTA
CTCCATCGGCTTCCTCGTCGGCTGGCCGATCATCCTCTTCCTGATGGCTGAACGCCTGCGCAACCTCGGCAAATTCACCT
TCTCCGACGTGGCGTCCTATCGTCTCGGTCAGACGCAGATCCGTCTGCTCTCGGCGTTCGGTTCGCTGATCGTCGTGGCC
TTCTACCTGATCGCGCAAATGGTCGGTGCCGGCAAGCTGATCCAGCTGCTGTTCGGCCTGGACTACTACGTGGCCGTGGT
GCTGGTCGGTGTGCTGATGGTCATGTACGTGCTGTTCGGCGGCATGCTGGCGACCACCTGGGTGCAGATCATCAAGGCGG
TCCTGCTGCTGTCCGGCGCCAGTTTCATGGCCATCATGGTGATGAAGAGCGTGGGCTTCGATTTCGGCAGCCTGTTTGCC
GAAGCGGTGAAGATTCACGAGAAGGGTGCGCAGATCATGAGCCCGGGCGGCCTGGTCTCCGACCCGATCTCGGCGATCTC
CCTCGGCCTGGCGCTGATGTTCGGTACCGCCGGCCTGCCGCACATCCTGATGCGCTTCTTCACCGTCTCCGACGCCAAGG
AAGCGCGCAAGAGCGTGTTCTACGCCACCGGCTTCATCGGCTACTTCTATATCCTGACCTTTATCATCGGCTTCGGCGCG
ATCCTGCTGGTCAGCACTAACCCGGAGTTCAAGGACGTGACCGGCGCCATCGTCGGTGGCACCAACATGGTCGCCATCCA
CCTGGCCAGCGCCGTGGGCGGCAACCTGTTCCTCGGTTTCATCTCTGCGGTCGCCTTCGCCACCATTCTCGCCGTTGTCG
CGGGTCTGACCCTGGCCGGTGCCTCGGCGGTTTCCCATGACCTGTATGCCTGCGTGATCAAGCAGGGCAAGGCGCGGGAA
GAAGACGAGATGCGCGTGACCAAGCTGACCACCCTGACTCTGGGCGTGGTGGCGATTCTGCTGGGCATCATCTTCGAGAA
GCAGAACATCGCCTTCATGGTCGGCCTGGCATTCTCCATCGCCGCCAGCTGCAACTTCCCGGTGCTGTTCCTTTCCATGT
ACTGGAAAGGCCTGAGCACCCGCGGCGCGTTGTTCGGCGGCTCGCTGGGGCTGTTCACTGCGCTGCTGCTGACCATCATC
AGCCCGACCGTATGGGTCGACGTGTTCGGCTTTGCCGAAGCGATCTTCCCCTACAAGTACCCGGCGCTGTTCTCGATGGC
TGCGGCATTCGCCGGCATCTGGTTCTTCTCGGTCACCGACAAGTCCAAGCGTGCCGGGGAAGAGCGTGAGCGCTTCTTCG
CCCAGTTCGTCCGTTCGCAGACTGGCCTGGGGGCTACTGGCGCCGTCGCGCACTGA

Protein sequence :
MILRFLMTALLLAVSPALLADAITGEVEKQATNYTAIIMFVVFIAFTMGITKWAAKRNTSTADYYTAGGSITGFQNGLAI
AGDFMSAASFLGISALVYTSGYDGLIYSIGFLVGWPIILFLMAERLRNLGKFTFSDVASYRLGQTQIRLLSAFGSLIVVA
FYLIAQMVGAGKLIQLLFGLDYYVAVVLVGVLMVMYVLFGGMLATTWVQIIKAVLLLSGASFMAIMVMKSVGFDFGSLFA
EAVKIHEKGAQIMSPGGLVSDPISAISLGLALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGA
ILLVSTNPEFKDVTGAIVGGTNMVAIHLASAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYACVIKQGKARE
EDEMRVTKLTTLTLGVVAILLGIIFEKQNIAFMVGLAFSIAASCNFPVLFLSMYWKGLSTRGALFGGSLGLFTALLLTII
SPTVWVDVFGFAEAIFPYKYPALFSMAAAFAGIWFFSVTDKSKRAGEERERFFAQFVRSQTGLGATGAVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 3e-130 61
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 4e-73 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_2938 YP_007241071.1 SSS sodium solute transporter BAC0564 Protein 5e-169 76
Psest_2938 YP_007241071.1 SSS sodium solute transporter BAC0570 Protein 7e-143 67