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Name : Psest_2522 (Psest_2522) Accession : YP_007240674.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Unknown Product : PAS domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 2702083 - 2703651 bp Length : 1569 bp Strand : + Note : PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box DNA sequence : ATGCGTAACAACCAGCCCGTAACTCAACGTGAATATGCCTTTCCCGACCAGCAGCGATTAGTCTCGACTACCGACCTGAA AGGCCAGATCACCTATTGCAACAACATCTTCGTAGAGGTCAGCGGCTTCGATCGCGACGAGCTGATACGCGCACCGCACA ATCTGGTACGCCATCCGGATGTGCCGCCGGCCGTGTTCGACCATATGTGGACCACGCTCAAGCAGGGCAAACCCTGGATG GGCATCGTCAAGAACCGGCGCAAGACCGGCGACCACTACTGGGTCAATGCCTATGTCACGCCAATTCTCGATCAGCAGCG GCAGGTGACAGGCTACGAATCGGTACGGACCAAACCAACCCGGGAACAGGTGCAGCGCGCTGAAGCACTGTATGAGCGGA TCAACTCCGGCAAGAGCGGCGTGCCCCAGAGCGATCGCTGGCTCCCGGTGCTGAGCAAGTGGTTGCCCTTCCTGATCATC AGTCAGCTCGGATTTCTCGTCGGCGCAGGCTTCGACCATGCCCTGGGGTTCATCGCCGCAGCCGCGCTTGCCGTTCCGCT CGGACTTGCCGGCTTGCAGTGGCAGCAACGCGGTCTGAAACGCTTGTTGCAGCTGGCGAGCCAGACCACCAGCGATCCGC TCATTGCACGCATGTATACCGACAGCCGTGGCGTAGAAGCCCAGCTCGAGATGGCGATGCTCAGTCAGCAGGCGCATCTG AAAACCTGCCTCACCCGCCTGCAAGACACCGCTGTACAACTGCAAGGCCAAGCCAAGCAGGCCGACTCGCTGGCACAGAG CTGCGCAAATGGCCTGGCGCAGCAGAATCAGGAAACCGAACAGGTAGCGACTGCCATCAACGAAATGGCTGCGACCACTC AGGAAGTAGCAAGCAACGTCGCCCTGGCGGCCGAAGCCACCCGCGAAGCGAGCCGTCTCACCATTCATGGTCGCGAGGTC ACCGCGGAGACACGAAAGGCGATACAGCAGCTGGCCGATTCGGTAGCCAGTACCGGCGAGGCGGTCAATCAGCTAGCCAA CGACAGCGACGCAATCGGTGGCGTGGTCGATGTGATCAAGAGCATTGCCGATCAGACCAACCTTCTGGCCCTCAACGCTG CGATCGAAGCGGCACGGGCCGGCGACAGCGGACGCGGGTTTGCCGTGGTTGCAGATGAGGTACGGCAGCTGGCACAACGC ACTGCCGAGGCCACTGGCGAAATTCACCAGCTGATCGAGAAGCTGCAACTGCAAGCTCGACACGCCGTTCAGACCACCGA AGAAGGTCGTGTCCAGGCCACGCGTGGTGTCGACCAGGTTGCTCAGGCGGACCAGGCCCTGACCGGCATAAACGAGGCGA TGGGCAACATCATCGACATGACCACGCAGATCGCCTCGGCAACCGAGGAGCAAAGCGCAGTGGCCGATGAGATCAGCAAC AACGTCAGCACCATTGCCCGCCTGGCCGATCAGACCTCGGGAGACGCACGCAGCTCGGCGCTGCTTAGCGAAGACCTCGC CGCAACGGCCGAAGGTCAGTACGCGCTGGTGGAACGCTTCAACCGCTGA Protein sequence : MRNNQPVTQREYAFPDQQRLVSTTDLKGQITYCNNIFVEVSGFDRDELIRAPHNLVRHPDVPPAVFDHMWTTLKQGKPWM GIVKNRRKTGDHYWVNAYVTPILDQQRQVTGYESVRTKPTREQVQRAEALYERINSGKSGVPQSDRWLPVLSKWLPFLII SQLGFLVGAGFDHALGFIAAAALAVPLGLAGLQWQQRGLKRLLQLASQTTSDPLIARMYTDSRGVEAQLEMAMLSQQAHL KTCLTRLQDTAVQLQGQAKQADSLAQSCANGLAQQNQETEQVATAINEMAATTQEVASNVALAAEATREASRLTIHGREV TAETRKAIQQLADSVASTGEAVNQLANDSDAIGGVVDVIKSIADQTNLLALNAAIEAARAGDSGRGFAVVADEVRQLAQR TAEATGEIHQLIEKLQLQARHAVQTTEEGRVQATRGVDQVAQADQALTGINEAMGNIIDMTTQIASATEEQSAVADEISN NVSTIARLADQTSGDARSSALLSEDLAATAEGQYALVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 1e-77 | 41 |
