Gene Information

Name : Psest_2260 (Psest_2260)
Accession : YP_007240419.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2406534 - 2407178 bp
Length : 645 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family

DNA sequence :
TTGATTAGGGTGCTGGTGGTCGATGACCACGATCTGGTTCGCACGGGCATCAGTCGTATGCTGGCGGACATCTCCGGACT
ACAGGTAATAGGTCAGGCTGACTCCGGCGAGGACGCGATCCGCAAGGCTCGGGAGCTCAAGCCTGACGTCGTGCTGATGG
ACGTCAAGATGCCGGGTATCGGCGGCCTGGAGGCGACCCGCAAGCTGTTGCGCAGCTATCCGGATCTCAAGGTCATTGCC
GTGACGATCTGTGAAGAAGACCCGTTTCCGACGCGTCTCCTGCAGGCCGGTGCGGCGGGATACCTGACCAAGGGTGCAGG
CCTTGAAGAGATGGTCCAGGCCATTCGCATGGTGTTTGGCGGTCAGCGTTACATCAGTCCGCAGATCGCCCAGCAGCTGG
CGCTCAAATCGTTCCAGCCGCAGCTCAGCGAGTCGCCGTTCGATCTGCTTTCCGAGCGGGAAATCCAGATCGCGTTGATG
ATCGCCAACTGCCAGAAAGTGCAGAGCATCTCCGACAAGCTCTGCCTCTCGCCGAAAACGGTCAATACCTACCGTTATCG
CATCTTCGAAAAGCTGTCGATTACCAGTGATGTCGAGCTTGCCCTGCTGGCGGTTCGTCACGGGATGGTCGACACCGTCA
ACTGA

Protein sequence :
MIRVLVVDDHDLVRTGISRMLADISGLQVIGQADSGEDAIRKARELKPDVVLMDVKMPGIGGLEATRKLLRSYPDLKVIA
VTICEEDPFPTRLLQAGAAGYLTKGAGLEEMVQAIRMVFGGQRYISPQIAQQLALKSFQPQLSESPFDLLSEREIQIALM
IANCQKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDTVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 9e-52 58
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 9e-52 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_2260 YP_007240419.1 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain VFG1889 Protein 5e-50 55