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Name : Psest_2124 (Psest_2124) Accession : YP_007240288.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Virulence Product : TRAP transporter subunit DctM Function : - COG functional category : - COG ID : - EC number : - Position : 2255256 - 2256533 bp Length : 1278 bp Strand : + Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit DNA sequence : ATGACCGTCGTCGTCTTCCTTTCATCGCTGCTGGGTTTCATGACGCTTGGCATGCCCATCGCTTTCGCGCTGCTGCTCAC CGGCTCGGTGCTGATGTGGTACCTGGATTTCTGGGACGTGCAGCTGCTGGCGCAGAATCTTCAGGCCGGTGCCGACAGCT TCCCGCTGCTCGCGGTGCCGTTCTTCATTCTTGCCGGCGAGCTGATGAACGCCGGCGGCATCTCGCGGCGCATCATCGCC ATGGCACAGGCCTATTTCGGCCACAAGCGCGGCGGCCTGGGTTACGTGGCGATTGCCGCTTCGGTGCTGCTGGCCAGCAT GTCCGGCTCGGCGTTGGCCGATACCGCCGCGCTGGCGACGCTGCTGCTGCCGATGATGCGTGAGCGCGGTTATCCGCTGA GTTCGTCGTCGGGCCTGGTGGCGGCGGGCGGGATCATCGCGCCGATCATCCCGCCGTCGATGCCTTTCGTGATCTACGGC GTGGTGACCGGCACTTCGATCAGCCAGCTGTTTCTCGCCGGCATGGTGCCGGGGCTGATCATGGGCATGGGCCTGATCGT TGCCTGGACGCTGATCGCCCGGCGGATCGACGAACCCAAACAGGAAAAGGCCAGCGCTGCAGAGCGCCGCCGTGTGCTGG TCGACGGCGCCGCCGCGCTGATGCTGCCTGTGATCATCGTTGGCGGGCTGCGTGGCGGCCTGTTCACCCCGACCGAAGCG GCGGTGGTCGCCGCCGTCTATGCCCTGGCCGTTTCGACATTGCTCTATCGCGAGCTGAACTGGGCCGGGTTGGTCGAGGT GCTGACCCGCGCCAGTCGCACCACCGCCTCGGTGATGTTCCTCTGCGCCGCCGCGACGGTGTCCGCGTACATGATCACCC TGGCGCAACTGCCCGACGAGATCGCCGCGATGCTCGGCCCGCTGGCGCAGGATCCGAAGCTGCTGATGGTCGCCATCATG CTGCTGATGATCGCCGTCGGCATGGTGCTCGACCTGACGCCGACCATCCTGATCCTCGGTCCGGTGCTGGCGCCGATCGC GATCAAGGCCGGCATCGACCCGGTGTACTTCGGAGTGATGTTCGTGCTGATCGGCTCCATCGGGCTGATCACGCCGCCGG TGGGCACGGTGCTCAACGTGGTCGGCGGTATCGGCCGGCTGCGCATGGAAACCCTGGTGCGCGGCGTCATGCCGTTCTTC CTTATCTATCTGGTGATCGTCGGGCTGCTCATCGCCGTGCCCTCGATCATCACCGTACCCCTGGCCTGGCTGCGGTAA Protein sequence : MTVVVFLSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDVQLLAQNLQAGADSFPLLAVPFFILAGELMNAGGISRRIIA MAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALATLLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYG VVTGTSISQLFLAGMVPGLIMGMGLIVAWTLIARRIDEPKQEKASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPTEA AVVAAVYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPDEIAAMLGPLAQDPKLLMVAIM LLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVMFVLIGSIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFF LIYLVIVGLLIAVPSIITVPLAWLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 7e-40 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 7e-40 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 6e-40 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psest_2124 | YP_007240288.1 | TRAP transporter subunit DctM | VFG1110 | Protein | 3e-40 | 41 |
