Gene Information

Name : Psest_2064 (Psest_2064)
Accession : YP_007240228.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Unknown
Product : ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2189584 - 2191245 bp
Length : 1662 bp
Strand : -
Note : PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region

DNA sequence :
ATGGCCGAACAACCGATAGCCGAGAATCTGGTCGAGGTCCGCGACCTGGCCGTCGAGTTCGTCACTGGCGAGCAGGTCCA
GCGAGTCGTCGAGGGTGTCACCTTCGATATCCGCAAAGGCGAGACCCTGGCCCTTGTCGGCGAAAGCGGCTCGGGCAAGT
CGGTCACCGCACATTCCATCCTGCGCCTGCTGCCCTACCCGCTCGCCCGGCATCCGCAGGGGCAGATCCTGTTCCATGGC
CAGGATCTGCTCAAAGCCGACGAAAAGGCCATGCGTAAGATCCGCGGCAATCGCATCGCCATGGTCTTCCAGGAACCGAT
GACCTCGCTCAACCCACTACACACCGTGGGCAAGCAGATCAACGAGGTATTGGAGATTCACAAGGGTCTGCGTGGCAAGG
CGGCGACCGCCCGCACGCTGGAGTTGCTGGAACTGGTTGGCATCCCCGAGCCGCGCAAGCGCATCCGTGCCTACCCGCAC
GAGTTGTCGGGCGGGCAACGCCAGCGAGTGGTGATTGCCATGGCGCTGGCCAACGAGCCGGAGCTGCTGATCGCCGACGA
GCCGACCACGGCGCTGGACGTCACCGTGCAGCTGAAAATCCTCGAACTGCTGAAGGAATTGCAGGCTCGGCTGGGCATGG
CGCTGCTGCTGATCAGTCACGATCTCAACCTGGTTCGACGCATTGCCCATCGCGTATGTGTCATGCAGCGCGGTCGCGTC
GTCGAACAGGCGTTGTGTGAAGATCTGTTCCGTGCGCCTCAGCATCCGTACACCCAGGAGTTGCTCGCGGCCGAGCCCAG
CGGCGGCCCGGTGGCAGTCGAGGAAGCGCCGCCATTGCTTGAGGTCGACGACCTGCGCGTGTGGTTCCCGATCAAGAAGG
GCCTGCTGCGACGCACCGTCGATCACATCAAGGCAGTCGATGGTGTGAACTTCAGCCTGCCCAAGGGGCAGACGCTGGGC
ATCGTTGGCGAAAGCGGTTCCGGCAAGTCCACCCTGGGTTTGGCTATCCTTCGATTGTTGGGTAGTCGCGGCGAGATACG
CTTCCAGGGCCAGCACCTGCAAAGCATGTCGCAGCGCCAGGTACGGCCGTTGCGCCGGCAGATGCAGGTGGTCTTTCAGG
ACCCCTTCGGCAGCCTGAGCCCGCGTATGTCGGTTGGGCAGATCGTTGGCGAGGGGTTGCACATCCACCGGATGGGCAAT
GCCAAGGAGCAGGAACAGGCAATCATTGAGGCGCTCGTGGAGGTTGGTCTCGATCCGGAAACCCGGCATCGCTACCCCCA
TGAGTTTTCCGGCGGACAACGGCAACGCATTGCCATTGCCCGGGCTCTGGTGTTGAAGCCGGCGCTGATACTACTCGACG
AGCCGACTTCGGCGCTCGATCGCACGGTACAACGACAGGTGGTGGAGCTTCTGCGCTCGTTGCAGGCCAAGTACAACCTG
ACCTACCTGTTCATCAGCCATGACCTGGCGGTGGTCAGGGCGCTGAGCCACCAGATGATGGTGGTCAAGCAGGGCCAGGT
GGTGGAACAAGGTGCGGCCGCTGACATCTTTGCGGCACCGCAACATCCGTATACACAGCAGCTGCTGGAATCCGCCTTCA
TGGCGCCCGGCACTGCCGAACAACCAGAAGAGGGACAAGCACATGGGTTTTCTCACCGGTAA

Protein sequence :
MAEQPIAENLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPQGQILFHG
QDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHKGLRGKAATARTLELLELVGIPEPRKRIRAYPH
ELSGGQRQRVVIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRV
VEQALCEDLFRAPQHPYTQELLAAEPSGGPVAVEEAPPLLEVDDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPKGQTLG
IVGESGSGKSTLGLAILRLLGSRGEIRFQGQHLQSMSQRQVRPLRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHRMGN
AKEQEQAIIEALVEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNL
TYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPYTQQLLESAFMAPGTAEQPEEGQAHGFSHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 8e-100 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-78 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-78 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-78 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-78 43