Gene Information

Name : Psest_0204 (Psest_0204)
Accession : YP_007238445.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 204197 - 204868 bp
Length : 672 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGAATTCTTCTGGTCGAGGACCATCCCCAGCTGGCCGAAAGCGTGGCGCAGGCATTGCGCGCCGCCGGCTGGACCGT
GGACCTGCTGCAGGACGGCATCGCCGCCGATCTGGCGCTGGCCAGCGAGGATTACGCGCTGGCGATCCTCGACGTCGGCC
TGCCGCGGCTGGATGGCTTTCAGGTGCTGGCGCGCCTGCGCGAACGCGGCAAGACCCTGCCCGTGCTGATGCTGACCGCG
CGCGGCGAGGTCAGCGACCGCGTGCATGGGCTCAATCTCGGTGCCGACGATTACCTGGCCAAGCCGTTCGAGCTGTCCGA
GCTGGAGGCGCGGGTCAAGGCGCTGCTGCGGCGCAGCGTCGGCGGCGGCGAACGCCAGCAGCGCTGCGGTGCGCTGGTCT
ATGACCTGGATGCGCGGCGCTTCAGCCTGGCCGAGGAGCCGCTGACGCTGACCTCCCGCGAACAGGGCGTGCTCGAGGCG
CTGATCGCCCGCCCCGGCCGGGTGATGAGCAAGGATCAGCTGGCCGCCCAGGTATTCGGCCTGGACGAGGACGCCAGCGC
CGAGGCCATCGAGATCTACATTCATCGTCTGCGCAAGAAGCTCGAAGGCCAGCCGGTGCGCATCGTTACCTTCCGCGGTC
TGGGCTACATGCTCGAGGCGCTCGATGGCTGA

Protein sequence : 
MRILLVEDHPQLAESVAQALRAAGWTVDLLQDGIAADLALASEDYALAILDVGLPRLDGFQVLARLRERGKTLPVLMLTA
RGEVSDRVHGLNLGADDYLAKPFELSELEARVKALLRRSVGGGERQQRCGALVYDLDARRFSLAEEPLTLTSREQGVLEA
LIARPGRVMSKDQLAAQVFGLDEDASAEAIEIYIHRLRKKLEGQPVRIVTFRGLGYMLEALDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-28 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0204 YP_007238445.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 2e-35 46
Psest_0204 YP_007238445.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 4e-33 45
Psest_0204 YP_007238445.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 6e-31 41
Psest_0204 YP_007238445.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 1e-35 41
Psest_0204 YP_007238445.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 7e-35 41
Psest_0204 YP_007238445.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0204 YP_007238445.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 1e-32 44
Psest_0204 YP_007238445.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 2e-28 42