Gene Information

Name : Psest_2011 (Psest_2011)
Accession : YP_007240175.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Unknown
Product : permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2128144 - 2129460 bp
Length : 1317 bp
Strand : +
Note : PFAM: Na+/H+ antiporter family

DNA sequence :
ATGAACGCAGTTGTTGCGGCAGTCGGCATCATGCTGATCCTGAGTCTATGCCGCGTGCATGTAGTGGTTGCGCTTATTGC
AGGAGCGCTGGCCGGCGGTTTGATCGGTGGATTGGGCATCGAGGGCAGTCTCGCCGCGTTCAATAAGGGGCTTGGCGGCG
GGGCAACGGTTGCATTGTCTTACGCCTTGCTCGGCGCTTTCGCCGTGGCTATCGGGAAAAGCGGCCTTGCGCACGCCCTC
GCGGACAAGGCGCTGAACCTGGTTGGCAAGCAAGGTACGCAGGGTGCCGGCGCCATTAAGTGGCTGATGATTGGTTTGCT
GCTTGCCGTAGCCGTGTCTTCGCAGAATATTCTGCCTATCCATATTGCGTTTATTCCGCTTCTGGTTCCGCCGCTCCTTT
TCGTGCTGTCGAAGATGAAGATGGATAGGCGTTTGATTGCCTGTGTTCTCGCATTTGGCCTCATTACCCCTTATATGTTT
CTCCCAGTCGGGTTCGGCAATATCTTCCTGAACGAGATTTTGTTGGCGAACGTTGCGAAGAGTGGGGTGGATGTCACCGG
TATCAAAGTTACGCAGGCGATGTTTATCCCCGCGATGGGGATGGTCGCGGGTCTAGTGGTGGCTTTCTACAGTTATCGCA
AACCTCGCGAGTATGACCTTGCGCGGATCGAGCAGGTTGAAAAGAGTACTGTCAGCTACAGCCCGCTGACGCTGTTGGTA
GCGGCGGTAGCCGTTGCGGCAGCATTCGTGATCCAGCTGTGGCTGGACTCAATGATCCTCGGTGCGCTCGTGGGATTTGT
CATTTTCTCTGTATCGGGCGTAGTGCGCTGGCGGGAGGCAGATGATCTTTTCACTGATGGCATGAAGATGATGGCCATGA
TCGGTTTCATCATGATTGCAGCCGCTGGGTTTGCCGAAGTGATGCGTGAAACCGGCGAGGTGAAGTTGCTGGTAGATGCA
TCGACTCAATGGATCGGAAACAGCAAGGCTGTTGGTGCATTGCTGATGCTCCTGGTCGGCTTACTGGTCACCATCGGCAT
CGGCTCGTCGTTCTCTACCGTGCCGATCATCGCCGCGATCTTTGTCCCGCTTGGCGTGGAGCTAGGGTTCAGCCCGCTGG
CGATCGTCAGCCTGGTCGGAACCGCAGGCGCTTTGGGAGACGGCGGTTCGCCGGCATCCGACTCCACTCTTGGGCCAACT
GCCGGTCTGAACGCAGATGGTCAGCATAACCATATCTGGGACACGGTCGTGCCGACCTTCCTGCACTACAACCTCCCATT
GTTGGCTTTCGGCTGGCTAGCGGCGATGACCCTGTAA

Protein sequence :
MNAVVAAVGIMLILSLCRVHVVVALIAGALAGGLIGGLGIEGSLAAFNKGLGGGATVALSYALLGAFAVAIGKSGLAHAL
ADKALNLVGKQGTQGAGAIKWLMIGLLLAVAVSSQNILPIHIAFIPLLVPPLLFVLSKMKMDRRLIACVLAFGLITPYMF
LPVGFGNIFLNEILLANVAKSGVDVTGIKVTQAMFIPAMGMVAGLVVAFYSYRKPREYDLARIEQVEKSTVSYSPLTLLV
AAVAVAAAFVIQLWLDSMILGALVGFVIFSVSGVVRWREADDLFTDGMKMMAMIGFIMIAAAGFAEVMRETGEVKLLVDA
STQWIGNSKAVGALLMLLVGLLVTIGIGSSFSTVPIIAAIFVPLGVELGFSPLAIVSLVGTAGALGDGGSPASDSTLGPT
AGLNADGQHNHIWDTVVPTFLHYNLPLLAFGWLAAMTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 8e-77 56
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 8e-77 56
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 7e-77 56
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 7e-77 56
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 5e-71 52
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 5e-71 52