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Name : Psest_1825 (Psest_1825) Accession : YP_007240001.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 1923758 - 1925773 bp Length : 2016 bp Strand : + Note : PFAM: Polysaccharide biosynthesis protein DNA sequence : GTGTTTGTGTTGAGTTTGGCGGAAAAATTGCGGGCCCGATTGGTTTCTTTGCCTCGGCGCTACAAGCGCTTGATCCAGCT AGCGGCGGATATCGTGCTGGTATGGGTGGCGCTCTGGTTGGCCTTTGTGGTGCGGCTGGGCGACTCTAAAAATATCGAGC CGTTGGATGGCCATGCCTGGCTGTTCGGTATCGCGCCCGTCATCGCTATTCCATTCTTTATCCGCTTCGGCATGTACCGC GCGGTGATGCGCTATTTCGGCAACGATGCGCTGATGGCCATTGCCAAGGCTGTCACGTTGTCTGCTTTGCTACTTTCCCT CGCTGTGTATTGGAACTCCGACGCGCCCAAGCTGATCCCGCGCTCGATGGTGTTCAACTACTGGTGGCTGAGCTTGGTAC TGATTGGCGGCTTGCGGTTGGTGATGCGCCAATACTTCATGGGGGATTGGTTCTCTCCGACCACACTTACCAAGTTCAAA GGCAAGGAAGCGGGTTTGCCGAAGGTTGCCGTATATGGCGCGGGCGCCGCGGGTAATCAGTTGGTTGCAGCGTTGCGCAT GGGGCGTGCCATGCGGCCGGTGGCGTTCATCGACGACGACCCGAACCTGCATAACCGAGTCATTGCCGGGCTGCGGGTGT ATTCGGCGAAGCATATCGGGCAACTGGTGGAGGATACGGGGGCGGGTGAGATCCTGCTGGCCATTCCTTCCGCTTCACGC GGCCGTCGGCGCGAGATTCTGGAAATGCTCGAGCGTTTCCCGCTGCATGTACGCAGTGTGCCGGGCTTTATGGATTTGGC GAGCGGAAAAGTGCAGGTCGAAGATATTCAGGAGGTGGATATTGCCGACCTGTTAGGGCGCGATGCCGTACCGCCGCAGC AGGCACTGTTCGAGAAGTGTATTCGTGGCAAGGTGGTGATGGTGACCGGTGCAGGCGGGTCTATCGGCTCGGAGCTGTGC CGTCAGATCCTTTCTAACAAGCCACAGGCGCTGCTGTTGTTCGAACACAGTGAGTTCAACCTTTACAGCATTCATATGGA ATTGGAGCGTCTGATCGAGCGTACGTCATTGCCGATCAGGCTGGTGCCGATCCTGGGTTCCATTCGCAATGCTGATCGAT TGCTGGATGTGATGCGCACCTGGGGAGTGGAGACGATTTACCACGCGGCTGCTTACAAGCATGTGCCTATGGTCGAGCAC AATGTGGCAGAGGGCGTACTGAACAATGTGATTGGCACCCTGAACACTGCGCAGGCAGCCGTTCAGGCGGGTGTGAGCAA CTTCGTGTTGATCTCCACTGACAAGGCCGTTCGGCCGACGAACGTGATGGGCAGTACCAAGCGTGTTGCTGAGCTGGTTC TGCAGGCGCTCAGCCGTGAGCCGGCGCCGGGCTTGTTTGGCACCGCGGGCAGCGTGCATCACGTCAACAAGACCCGTTTC ACCATGGTGCGTTTCGGCAATGTGCTCGGCTCGTCGGGCTCGGTCATCCCTCGTTTCTATGCGCAGATCCGCGCGGGCGG GCCGGTGACGGTGACGCATCCGAAGATCACCCGTTACTTCATGACCATTCCCGAAGCAGCTCAGCTGGTTATTCAGGCGG GTTCGATGGGGCAGGGTGGCGATGTGTTTGTGCTCGACATGGGGCAGCCGGTTAAGATCGCTGAGCTGGCCGAGAAACTC ATTCATCTGTCTGGCCTGAGCGTGCGCTCGGAAAAGTGCCCGCACGGAGATATCGCTATCGAGTACACCGGTCTGCGCCC CGGCGAGAAGCTGTACGAGGAGCTATTGATCGGCGACAACGTGAGCCCCACCGAGCATCCGATGATCATGCGCGCCGATG AGGAATATCTCGACTGGGATGTACTCAAGGACCGGTTGGCGAAACTGCTCAAGGCGGTGGAAAGCGATGATTACCCGCAG GTACGGCAGCTGCTTCGCGAGGTGGTGAGCGGGTATGTACCGGAGGGAGAAATCGTCGACTGGATCTACCAGCAGCGGCG GGTAGAGCCCGAGTAG Protein sequence : MFVLSLAEKLRARLVSLPRRYKRLIQLAADIVLVWVALWLAFVVRLGDSKNIEPLDGHAWLFGIAPVIAIPFFIRFGMYR AVMRYFGNDALMAIAKAVTLSALLLSLAVYWNSDAPKLIPRSMVFNYWWLSLVLIGGLRLVMRQYFMGDWFSPTTLTKFK GKEAGLPKVAVYGAGAAGNQLVAALRMGRAMRPVAFIDDDPNLHNRVIAGLRVYSAKHIGQLVEDTGAGEILLAIPSASR GRRREILEMLERFPLHVRSVPGFMDLASGKVQVEDIQEVDIADLLGRDAVPPQQALFEKCIRGKVVMVTGAGGSIGSELC RQILSNKPQALLLFEHSEFNLYSIHMELERLIERTSLPIRLVPILGSIRNADRLLDVMRTWGVETIYHAAAYKHVPMVEH NVAEGVLNNVIGTLNTAQAAVQAGVSNFVLISTDKAVRPTNVMGSTKRVAELVLQALSREPAPGLFGTAGSVHHVNKTRF TMVRFGNVLGSSGSVIPRFYAQIRAGGPVTVTHPKITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGQPVKIAELAEKL IHLSGLSVRSEKCPHGDIAIEYTGLRPGEKLYEELLIGDNVSPTEHPMIMRADEEYLDWDVLKDRLAKLLKAVESDDYPQ VRQLLREVVSGYVPEGEIVDWIYQQRRVEPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-81 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-79 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psest_1825 | YP_007240001.1 | nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 2e-117 | 48 |
| Psest_1825 | YP_007240001.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 2e-77 | 44 |
