Gene Information

Name : Psest_1598 (Psest_1598)
Accession : YP_007239778.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1701916 - 1702599 bp
Length : 684 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator

DNA sequence :

ATGAAATTGCTGGTCGCCGAAGACGAACCCAAAACCGGCATCTATCTGCAGCAGGGCCTTAGCGAGGCCGGCTTCACCGT
CGACCGCGTCACCAGCGGCACCGACGCGCTGCAGCATGTGCTGAGCGCGCCTTATGACCTGCTGATTCTCGACGTGATGA
TGCCGGGTCTGGATGGTTGGGAAGTGCTGCGGCTGGTGCGGGCTTCCGGCAACGAAGTGCCGGTGCTGTTTCTCACCGCG
CGCGACCGCGTCGAGGATCGGGTAAAAGGGCTGGAGCTCGGCGCCGACGACTATCTGGTCAAGCCGTTCGCCTTTTCCGA
GCTGCTGGCACGGGTGCGTACCTTGCTCCGGCGCGGCAACGCGGCGGCCCTGCAGACGCAGCTGAAAGTCGCCGATCTGG
AAGTCGACCTGCTCAAGCGCCGCGCGGTGCGCGCCGGTCAGCGTATCGACCTGACCGCCAAGGAATTCGCCCTGCTGGAA
CTGCTGCTGCGCCGGCGCGGCGAGGTGCTGCCGAAATCGCTGATCGCCTCGCAGGTGTGGGACATGAACTTCGACAGCGA
CACCAACGTCATCGAGGTGGCGATCCGGCGTTTGCGGGCAAAGATCGACGATGGCTTCGAGCCCAAGCTGATCCATACCG
CACGGGGCATGGGCTACATGCTCGACGAGCCGGACACGCCATGA

Protein sequence :

MKLLVAEDEPKTGIYLQQGLSEAGFTVDRVTSGTDALQHVLSAPYDLLILDVMMPGLDGWEVLRLVRASGNEVPVLFLTA
RDRVEDRVKGLELGADDYLVKPFAFSELLARVRTLLRRGNAAALQTQLKVADLEVDLLKRRAVRAGQRIDLTAKEFALLE
LLLRRRGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRAKIDDGFEPKLIHTARGMGYMLDEPDTP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	2e-54	56
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	9e-54	54

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Psest_1598	YP_007239778.1	heavy metal response regulator	BAC0638	Protein	8e-84	86
Psest_1598	YP_007239778.1	heavy metal response regulator	BAC0083	Protein	2e-81	80
Psest_1598	YP_007239778.1	heavy metal response regulator	BAC0197	Protein	9e-65	65
Psest_1598	YP_007239778.1	heavy metal response regulator	BAC0111	Protein	5e-69	63
Psest_1598	YP_007239778.1	heavy metal response regulator	BAC0308	Protein	5e-63	62
Psest_1598	YP_007239778.1	heavy metal response regulator	BAC0125	Protein	1e-61	61
Psest_1598	YP_007239778.1	heavy metal response regulator	BAC0347	Protein	8e-63	59
Psest_1598	YP_007239778.1	heavy metal response regulator	NC_002516.2.879194.p	Protein	7e-28	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Psest_1598	YP_007239778.1	heavy metal response regulator	VFG0596	Protein	9e-55	56
Psest_1598	YP_007239778.1	heavy metal response regulator	VFG1390	Protein	4e-39	47
Psest_1598	YP_007239778.1	heavy metal response regulator	VFG1389	Protein	1e-35	46
Psest_1598	YP_007239778.1	heavy metal response regulator	VFG1386	Protein	3e-37	45