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Name : Psest_1383 (Psest_1383) Accession : YP_007239570.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 1492741 - 1494681 bp Length : 1941 bp Strand : - Note : PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid DNA sequence : ATGCAACTCTATCTCTGCGAAAAACCTTCCCAGGCCCGCGACATCGCCAAGGTGCTCGGCGCCAACCGGCGTGGCGACGG GTGCCTGCAGGGCGCGGGGGTGACGGTGACCTGGTGCATTGGCCATCTGCTGGAAACCGCCCCGCCGGACGCCTACGACC CGCGCTACAAGCGCTGGGTGCTGGCCGACCTGCCGATCGTGCCGGAACGCTGGAAGATGCTGGTCAAGCCGAAAACCGCC AGCCAGTTCAAGGCGGTCAAGCGCCTGCTCGGCGAATGCAGCGAACTGGTGATCGCCACCGACGCCGACCGCGAAGGCGA GATGATCGCCCGCGAGCTGGTCGAGCATTGCCGCTATCGCGGACCGATCCGCCGGTTATGGCTGTCGGCGCTGGACGATG CCTCGATCCGCAAGGCGCTGGCCGCGCTCAAGCCCGGCGCCGAGACCTTCAACCTCTACCACGCCGCCCTTGGCCGCTCG CGTGCCGACTGGCTGATCGGCATGAACATGAGCCGGCTCTTCACCCTGCTCGGCCGCCAGTCCGGTTATCAGGGTGTGTT GCCGGTCGGCCGGGTACAGACGCCGACGCTGCGCCTGGTAGTCGACCGCGACCGCAGCATCGCCGACTTCATCCCGGTGC CGTTCTGGGCCATCGATGTGCAGTTGCTCGCCGATGGCACCGCCTTCACCGCGCAGTGGCAGGCGCCGGATGACTATTGC GATGATCAGGGCCGCTGCCTCGATCAGGCCCGTGCACAGCAGGCTGCCGAAGCCATGCGCAACGCCGCCTGCGCACGTCT GCTGAAGCTCAAGACCGAACGCCAGCGCGAGGCGGCGCCATTGCCTTTCGATCTCGGCACGCTGCAGGAGGTCTGCTCGA AGAAGCTCGGCCTCGGCGCTCAGGAAACCCTCGACATCGCCCAGGCGTTGTACGAAACCCACAAGCTGATCACCTACCCG CGCAGCGACTGCGGCTACCTGCCGCTGAGCCAGCACGGCGAAGCGCGGGCAATCGTCGCAGCGCTGGCTCAATCCGATCC AACGCTCGCCGCGCTTGAGCCGCATCTGGACCTGTCGCGCCGCTCACGGGCCTGGAACGACGCCAAGGTCGGCGCTCACC ACGGCATCATTCCCACCGCAGCAGTGCGGGGTCTGGAACGTCTGTCCGGGCGACCGCGTGCGGTGTACGAGTTGATCCGC GCGCGCTATCTGGCGCAGTTTCTGCCCAACCACGAGTACGACCGCACCCAGGCCGACTTCGACTGCGCCGGCCAGGCGCT ACGGGCGGTGGGCAAGCGCATCGTCGAACCGGGCTGGAAACGCGCCATGCCCGAAGCGCTGGCGCCGGCACGGGGCAATC GCGAGGCGCCCGCGCCGCAAAGCCTGCCGACCCTGCAACAGGGTCAGGATTACGCGGTGGGCGAGATCAACCTCAAGGAC CAGCAGACCCATCCGCCGAAACCCTTCACCGAAGGCGACCTGATCAAGGCGATGAAGAACGTCGCCAAGCTGGTGGACGA CCCGCGGCTGAAGCAGAAGCTCAAGGACACCACCGGCATCGGCACCGAAGCGACCCGCGCCGGGATCATCCAGGGCCTGC TCGACCGCGGCTATCTGCTTCGCCAGGGCAAGGCGCTGGCGGCGACACCGGCGGCGTTCAGCCTGATCGATGCCGTGCCG CGGCCGATCGCCGACCCCGGGACCACGGCGATCTGGGAACAGGCGCTGGACATGGTGCAGAGCGGCGAGATGCCGCTGGA AGAATTCGTCGCCAAACAGTCGGCGTGGATGAGCAAGCTGGTCGAACGCTGCGCCGGGCTGCGCATGACCATCAGCGGCC CGCCGGTGGCCGCGGGCCGAGGGGGAAAACCGTGGAAAAAGAAACGCAGCGCCGCGCCGCGCAAACCGGCTCGGCGACGC AAGCCGGCCGCTGCGGACTGA Protein sequence : MQLYLCEKPSQARDIAKVLGANRRGDGCLQGAGVTVTWCIGHLLETAPPDAYDPRYKRWVLADLPIVPERWKMLVKPKTA SQFKAVKRLLGECSELVIATDADREGEMIARELVEHCRYRGPIRRLWLSALDDASIRKALAALKPGAETFNLYHAALGRS RADWLIGMNMSRLFTLLGRQSGYQGVLPVGRVQTPTLRLVVDRDRSIADFIPVPFWAIDVQLLADGTAFTAQWQAPDDYC DDQGRCLDQARAQQAAEAMRNAACARLLKLKTERQREAAPLPFDLGTLQEVCSKKLGLGAQETLDIAQALYETHKLITYP RSDCGYLPLSQHGEARAIVAALAQSDPTLAALEPHLDLSRRSRAWNDAKVGAHHGIIPTAAVRGLERLSGRPRAVYELIR ARYLAQFLPNHEYDRTQADFDCAGQALRAVGKRIVEPGWKRAMPEALAPARGNREAPAPQSLPTLQQGQDYAVGEINLKD QQTHPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLDRGYLLRQGKALAATPAAFSLIDAVP RPIADPGTTAIWEQALDMVQSGEMPLEEFVAKQSAWMSKLVERCAGLRMTISGPPVAAGRGGKPWKKKRSAAPRKPARRR KPAAAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 63 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 62 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 61 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 7e-153 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 7e-153 | 50 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 5e-153 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 4e-147 | 49 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 2e-149 | 48 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 5e-113 | 41 |
