|
Name : Psest_0132 (Psest_0132) Accession : YP_007238375.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Virulence Product : type VI secretion protein EvpB Function : - COG functional category : - COG ID : - EC number : - Position : 130780 - 132258 bp Length : 1479 bp Strand : - Note : PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family DNA sequence : ATGACCACTAGCGCAGCCGCCGTCGAGCACGGCAACCACCTCGCCGAAGGCGGCATCCTCGACCGCATCATCGCCGAAAC CCGCCTGACCCCGGACGACGAGGCCTACGACATCGCCAAGCGCGGCGTCTCGGCCTTTATCGAAGAACTGCTCAAGCCGC AGAACGAAAACGAGCCGGTGAAGAAGGCCATGGTCGACCGCATGATCGCGGAGATCGACGCCAAGCTCAGCCAGCAGATG GACGAGATCCTTCATCACCCGCAGTTCCAGGCGCTGGAATCCTCCTGGCGCGGCCTCAAGCTGCTGGTCGATCGCACCAA CTTCCGCGAGAACATCAAGCTCGAGCTGCTCAACGCCTCCAAGCAGGACCTGCTGGATGACTTCGAGGACAGCCCGGAGA TCGTTCAGTCCGGCCTGTACAAGCACATCTACACCGCCGAGTACGGCCAGTTCGGTGGCCAGCCGGTCGGCGCACTGATC GCCAACTATTTCTTCGACCCCAGCGCGCCCGACGTCAAGACCATGCAGTACGTCGCCAGCGTCGCCAGCATGTCCCACGC GCCATTCATTGCCGCGGCCGGTCCGAAATTCTTCGGCCTGGAAAGCTTCACCGGCCTGCCGGACCTGAAGGACCTCAAGG ATCACTTCGAGGGCCCGCAGTTCACCAAGTGGCAGAGCTTCCGCGAGCAGGAGGATGCCCGCTACGTCGGCCTGACCGTG CCGCGCTTCCTGCTGCGCAACCCCTACGATCCGGAAGACAACCCGGTGAAGAGCTTCGTCTACAAGGAAAACGTCGCCGG CAGCCACGAGCACTACCTGTGGGGCAACACCGCCTACACCTTCGCCAGCCGCCTGACCGACAGCTTCGCCAAGTTCCGCT GGTGCCCGAACATCATCGGCCCGCAGAGCGGCGGCGCAGTGGAAGACCTGCCGCTGCACCACTTCGAGAGCATGGGCGAG ATCGAGACCAAGATCCCGACCGAGGTGCTGGTTTCCGATCGCCGCGAGTACGAGCTGGCCGAGGAAGGCTTCATCGCCCT GACCATGCGCAAGGGCAGCGACAACGCCGCGTTCTTCTCCGCCAACTCGGCGCAGAAGCCGAAGTTCTTCGGCAACAGCG AGGAAGGCAAGACCGCCGAGCTGAACTACAAGCTCGGCACCCAGCTGCCCTACCTGTTCATCGTCAACCGCCTGGCGCAC TACCTGAAGGTGCTGCAGCGCGAGCAGATCGGCGCCTGGAAGGAGCGCACCGACCTCGAACTGGAACTGAACAAGTGGAT CCGCCAGTTCGTCGCCGACCAGGAGAACCCGAGCTCCGAAGTACGTAGCCGTCGTCCGCTGCGCGCCGCCCAGGTCAACG TCAGCGACGTCGAGGGCGAACCGGGCTGGTACCGCGTCAGCCTCAGCGTGCGTCCGCACTTCAAGTACATGGGCGCGGAT TTCACCCTGTCGCTGGTCGGCAAGCTGGACAAGGAATAA Protein sequence : MTTSAAAVEHGNHLAEGGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVKKAMVDRMIAEIDAKLSQQM DEILHHPQFQALESSWRGLKLLVDRTNFRENIKLELLNASKQDLLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALI ANYFFDPSAPDVKTMQYVASVASMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTV PRFLLRNPYDPEDNPVKSFVYKENVAGSHEHYLWGNTAYTFASRLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGE IETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSANSAQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAH YLKVLQREQIGAWKERTDLELELNKWIRQFVADQENPSSEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGAD FTLSLVGKLDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-161 | 62 |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 3e-161 | 62 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 4e-154 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psest_0132 | YP_007238375.1 | type VI secretion protein EvpB | VFG2093 | Protein | 5e-180 | 70 |
| Psest_0132 | YP_007238375.1 | type VI secretion protein EvpB | VFG2475 | Protein | 2e-168 | 67 |
