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Name : BPP43_03130 (BPP43_03130) Accession : YP_007234187.1 Strain : Brachyspira pilosicoli P43/6/78 Genome accession: NC_019908 Putative virulence/resistance : Virulence Product : lysyl-tRNA-synthetase LysU class II Function : - COG functional category : - COG ID : - EC number : - Position : 656379 - 657911 bp Length : 1533 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCAGAAAATCAAAATAATTCTGAAAATACACAAAATGAAAAAAATACTAGTGTAGAAAAAAATGCAGAAAAAGAAAA CAGAAGAGAAAAGTTAAACACATTAAGAAGCATGGGAATTAACCCATTTCCAAATAGTTATGATGTAACTTATAAATCAA AGGATATAGCAGAGAAATTTGAAGAGCTAGAAAAGAATGAAACTGAAGTTGCTGTTGCTGGAAGAATAATGCTTTATAGG GTAATGGGTAAATCTTCATTTTTAACTATAAAAGATTCTAAAGGCACTATTCAAGCATATATACAAAAAGATAAACTTGG TGATGAGTTTTATAATACAGTATTTAAAAAGCTTATAGATATAGGTGATATTGTAGGAGTAAAAGGAACTGTATTTAAAA CTAAAACAGGTGAAATTACAATATATGCAAGCGAATTAAAACTTCTTACAAAATCATTAAATCCGCTTCCTGAAAAATTT CATGGCTTAACAGATACAGAGCTTCGCTACAGACAAAGATATGTTGATTTAATAATGAATGATGATGTTAAAGAGGCTTT TATTAAACGCTCTAAAATGATATCTGCTATAAGAGAAATAATGATAGAGAATAATTTTCTTGAAGTAGAAACTCCTATGA TGCATCCATTAATTGGAGGAGCTAAGGCAAAACCATTTGTTACGCATCATAATACTTTAGATATGACACTTTATTTAAGA ATAGCACCTGAGCTTTATTTGAAAAGACTTATAGTTGGCGGTTTTGATAAAGTATTTGAGCTTAATAGAAATTTCCGTAA TGAAGGTATATCTACAAGACATAATCCAGAGTTTACTATGATGGAAGCATATATGGCTTATGCTAATTTCCACAAGGTTA TGGAATTGGTAGAAGAGGTGTTCTCTAAAGTATGTTTCAAATTAAATGGAAAATACACTTCTCAGTATAAAGATTATGAG ATTAACTTTAAGCCTCCATTTGCAAGAGTGCCTATGGTTGATTTAGTTAAAGAGCATTCTGGACTTGACTTTAATTCTAT ACAATCAGATGATGAAGCTATATCAAAAGCAAAATCAATAGGTGTAGAGATAGATACTTCAAAAGGTAAGCCTACTAGAT GGGAAGTTATGGTTGCTGTATTTGAAGAGAAAGTTGAAGAGAAGCTTATTCAGCCTACATTTGTTATTAATTATCCTAAA GCAGTTTCACCTCTTTCAAAATCTTATCCTGATAATCCAGACATTACAGAGAGATACGAACTCTTTATTGGCGGAATGGA GATGTCTAATGGATTCAGTGAACTTAATGACCCAATAGACCAAAAAGAGCGTTTTGAGGAACAGTTAAAAGCAAAAGCTC GCGGTGAAGATGAGACTATGGATATGGATTTAGATTTTATCAATGCATTAGAATATGGTCTTCCTCCTACTGGTGGGCTT GGAATAGGAATAGATAGAATGGCTATACTTTTCTTAAATGTGCCTAGCATTAGAGATACTATTCTTTTCCCTCAGATGAG AAAAATAGAATAG Protein sequence : MSENQNNSENTQNEKNTSVEKNAEKENRREKLNTLRSMGINPFPNSYDVTYKSKDIAEKFEELEKNETEVAVAGRIMLYR VMGKSSFLTIKDSKGTIQAYIQKDKLGDEFYNTVFKKLIDIGDIVGVKGTVFKTKTGEITIYASELKLLTKSLNPLPEKF HGLTDTELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTLDMTLYLR IAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYE INFKPPFARVPMVDLVKEHSGLDFNSIQSDDEAISKAKSIGVEIDTSKGKPTRWEVMVAVFEEKVEEKLIQPTFVINYPK AVSPLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQLKAKARGEDETMDMDLDFINALEYGLPPTGGL GIGIDRMAILFLNVPSIRDTILFPQMRKIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-105 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BPP43_03130 | YP_007234187.1 | lysyl-tRNA-synthetase LysU class II | VFG1668 | Protein | 3e-105 | 53 |
