Gene Information

Name : join (B488_06400)
Accession : YP_007232887.1
Strain : Liberibacter crescens BT-1
Genome accession: NC_019907
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 701030 - 702525 bp
Length : 1496 bp
Strand : -
Note : -

DNA sequence :
ATGTCCCAAGACAGTTGTTCAGTATCTCTATCGTCTGACGTTACCGAAGTACGAGAACAAAAATTAAATCTTCTTAAGAA
CTTAATAAAAGAAGTCTATCCTGCTCATTTTCATCGTACCTTTACAAATGCTCAATTAATAGAAAAATATAATTATCTAC
AACCTGAAGAACAATCAACCGATATTGTTATCTCTGCTGGTCGTATTCATTCTTCACGCAATTCAGGGATGTTCATGGAT
ATTCATGATAGCAGTCATAAAATCCAAGTATTTACACACAAGAATATTACTCTTCAATCCTCCCAAGAATTGTTACCAAT
GATAGATCTTGGAGATATTATAGGCGTGAAGGGTTATATGCGTCGTACCAAACGAGGCGAATTAACTATCAATGCAGAAG
AAATTACGATATTGGTCAAATCTCTTCGTCCAATGCCAGAAAAATATCATGGTCTCTCTGATATAGAACTCCGCTATCGT
AAACGTTATCTTGATATTATCAGTAATGAGGAATCCAAATTACGCTTTCAACAACGTAGTCATATTATTTCTTCTATCCG
TCAAATGATGCAGGAAGAAGAATTTATGGAAGTAGAAACTCCTATGCTGCAGCCAATTTATGGAGGAGCTACGGCTGATC
CTTTTAAAACACATCATAATATACTGAAAACTGATATGTATTTAAGAATTGCACCAGAGTTATATCTTAAGCGCCTTCTT
ATATCAGGCCTAACAGATAAGATATTTGAGCTTAACCGAAATTTTCGTAACGAAGGTATTTCAACTCGCCATAATCCAGA
ATTTACCATGATGGAAGCTTATTGGGCCTACACCGATTATCACGATATGATGTGTCTTGTTGAAAAGATATTTTCAACTC
TTGCTATTAATATGTATAAAAATACCGAATTTGCTTTTGATGAAAAAATTATTTCTTTTAAAGCCCCTTTCCCACGAAAA
CCTATGCCTGATTTAGTAAAAAATGCCACAGGAATTGATTTTAGGTGTTTGAAAAATAGTTCAGAAGCTCAATGTGCAGC
AAAGGATGCTGGATTTGAAGTTGAAAAAGATGCAAAATGGGGTGAAATTTTAATTTTCTTTTTGAAGAATTGGTTGAAAA
AAACCTTATACAACCAACACATGTTACACATTTTCCGAAAGATGTTTCTCCCTTTGCAAAAGAACTCCCTGAAGATAATC
GATTTGTAGAACGTTTTGAAACTTATTGTAATGGCTGGGAAATATGCAATGCTTTTTCTGAACTTAATGATCCCAAAGAA
CAACGTATACGTATGACAGAGCAGCTAATACAAGCGCATCAACGTGGTGAAAAAGAAAAAATATTGGATGAAGATTTTCT
TGAGGCAATGGAACATGGAATGCCCCCTGCTAGTGGTCTTGGCTTAGGAATTGATCGGTTAGTAATGCTTTTAACCAATG
CACCTTCAATCAGAGATGTTATTCTCTTTCCGGCACAACGAATTAAGATAACTTAA

Protein sequence :
MSQDSCSVSLSSDVTEVREQKLNLLKNLIKEVYPAHFHRTFTNAQLIEKYNYLQPEEQSTDIVISAGRIHSSRNSGMFMD
IHDSSHKIQVFTHKNITLQSSQELLPMIDLGDIIGVKGYMRRTKRGELTINAEEITILVKSLRPMPEKYHGLSDIELRYR
KRYLDIISNEESKLRFQQRSHIISSIRQMMQEEEFMEVETPMLQPIYGGATADPFKTHHNILKTDMYLRIAPELYLKRLL
ISGLTDKIFELNRNFRNEGISTRHNPEFTMMEAYWAYTDYHDMMCLVEKIFSTLAINMYKNTEFAFDEKIISFKAPFPRK
PMPDLVKNATGIDFRCLKNSSEAQCAAKDAGFEVEKDAKWGEILIFFLKNWLKKTLYNQHMLHIFRKMFLPLQKNLPEDN
RFVERFETYCNGWEICNAFSELNDPKEQRIRMTEQLIQAHQRGEKEKILDEDFLEAMEHGMPPASGLGLGIDRLVMLLTN
APSIRDVILFPAQRIKIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-83 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
join YP_007232887.1 lysyl-tRNA synthetase VFG1668 Protein 1e-83 44