Gene Information

Name : B488_03790 (B488_03790)
Accession : YP_007232626.1
Strain : Liberibacter crescens BT-1
Genome accession: NC_019907
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 437695 - 439107 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGACTTATAGTGCTTCTGATCTTATAAATCAGATAAAAGAAAATGACGTAAAATTCTTAGACCTACGTTTTACAGATAT
GAAAGGCAAGTTTCATCATATCACTCTAGATACTTCTATTATAGATGAAGAACTTTTATGCAACGGAATTGTTTTTGATG
CTTCATCAATTTTAGGATGGAAAGATATTAATCAGTCTGACATGTTGTTAAAGCCTGATATCAAAACAAAACATCTTGAT
CCTTTCTTTGCTCAATCAACTATGGGCATTATTTGTGATGTGTACGATCCATCCTCTAATACTCCTTATAATCGTGATCC
TCGTTATATAGCAAAAAAAGCTGAAGATTATCTAAAAAATACAGGTATAGGAGACGTTTTTTTTGTTGGACCAGAAGTTG
AATTCTTTGTATTTGATACCATAAAATACAACGTTACTCCTTATAGTTCTGTATTTAAGATAAATTCTTCAGAATTACCG
ATTGATATTGACGATGACAGCTCTAGAGAAAATTCAGGTCATCGACCGACTCTTAAAGGCGGTTATGTACCCCTTTTCCC
TCAAGACAGCTTACACGACATGCGCTCTGAAATGCTAACGTCCATGAAAAAAATGGGACTGTGTGTAGAAAAACATCATC
ATGAAGTCAGTCCTGCACAACATGAACTTGGATTAAAATTCGATACACTTTTATGTACTGGTGATCATGTACAGATATAC
AAATATATAGTCCATCAAGTGTCCAATTGTTATTGTAAAACAGCAACCTTCATGCCAAAACCTATATCATCTACCAATGG
CTCAGGTATGCATATAAACATGTCAATCTGGAAAAAAGATCAACCTGTTTTTGTTGGAAACCAAGAATGTGGTCTTTCTG
AAACTTGCCTTTATTTTATAGGAGGTATCATCAAACACGCTAAAGCTCTTAATGCATTTGCCAATCCTTCAACGAACTCT
TATAAACGTCTGGTATCAGGCTATGAAGCACCTGTACAATTAGTGTATTCAACACATAATCGCTCTGCTGCCTGCCGTAT
TCCATTTGCAACACATTCCAAAACAAAACGTATCGAAATCAGATTTGCTGATCCAAGTGCTAACCTTTACTTAACAGCTG
CAGCAATGTTAATGGCTGGCCTCGATGGTATAAAAAATAAAATACATCCTGGAAAACCAATAGATAGGAATATTTATAAT
ATGCCTCCAGATGAGATAAAAAATATTCCTCGAGTTTGCAACTCATTACGCGAAGCTCTTGAGAGCCTTAACAATGATCG
GGAGTTTCTCAAAAAAGGTAATGTTTTTGATGACGATCAGATTGATTCCTTCATTGAACTTAAAATGGAAGAAGTCATTC
GTCTAGAAATGACACCACACCCTCTGGAATTTGAAATGTATTATTCATCTTAA

Protein sequence :
MTYSASDLINQIKENDVKFLDLRFTDMKGKFHHITLDTSIIDEELLCNGIVFDASSILGWKDINQSDMLLKPDIKTKHLD
PFFAQSTMGIICDVYDPSSNTPYNRDPRYIAKKAEDYLKNTGIGDVFFVGPEVEFFVFDTIKYNVTPYSSVFKINSSELP
IDIDDDSSRENSGHRPTLKGGYVPLFPQDSLHDMRSEMLTSMKKMGLCVEKHHHEVSPAQHELGLKFDTLLCTGDHVQIY
KYIVHQVSNCYCKTATFMPKPISSTNGSGMHINMSIWKKDQPVFVGNQECGLSETCLYFIGGIIKHAKALNAFANPSTNS
YKRLVSGYEAPVQLVYSTHNRSAACRIPFATHSKTKRIEIRFADPSANLYLTAAAMLMAGLDGIKNKIHPGKPIDRNIYN
MPPDEIKNIPRVCNSLREALESLNNDREFLKKGNVFDDDQIDSFIELKMEEVIRLEMTPHPLEFEMYYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-89 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B488_03790 YP_007232626.1 glutamine synthetase VFG1399 Protein 1e-87 43