Gene Information

Name : B488_10150 (B488_10150)
Accession : YP_007233262.1
Strain : Liberibacter crescens BT-1
Genome accession: NC_019907
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter ATP-binding protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1110394 - 1111194 bp
Length : 801 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATCATATGATTGTATCGAGAAAGATGGCTTAAATGTTGAAAACATTACAGTATCTTATAGTAATGGACATACAGC
ATTACACAATGCAAGTTTTTCTATACCACGTGGGACAATAACAGCATTAATTGGTATTAATGGAGCAGGAAAATCAACAT
TGTTTAAAGCCATAATGGGCTTTGTTCCTCTAGCTGAAGGATCCATTTCTATTTTTAACAACCCTGTAATAAATGCACTT
AAAAAAAACTTCGTGGCATATGTTCCACAATCAGAAGAAGTAGATTGGCATTTTCCTATATTAGTAAAAGATGTTGTTAT
GATGGGGCGTTATGGACATATGAATTGGTTACGCATTCCTTCAACTCAAGATCACAGAATAGTAAATGAGGCGCTAGAAC
GTGTTAATATGAATTCTATGTATAAAAACCAAATTGGTGAACTCTCTGGAGGTCAAAAGAAGCGTGTTTTTCTTGCACGC
GCATTAGCTCAACAGGGGAAGATAATCTTACTTGATGAACCATTTACAGGAGTTGATTTTAAAACAGAAGAAGAAATTAT
CTCTTTGATGAAAGAATTGAGGGAAGAGGGTAAAATAATATTGGTATCCACACATAATATTGATTCTGTTCCTTATTTCT
GCGATCGAGTCGTTTTTATAAAGAAAACTATTATTTCTTTTGGCCTTACTCATGAAAAATTTAACCAAAAAAATTTCGTA
TCTACTTTTGGAGGAATTTCAAAACATTTAATGCAAATAAACATCAGCAATCCCAATCAACAATATCGTAATCTTGATTG
A

Protein sequence : 
MKSYDCIEKDGLNVENITVSYSNGHTALHNASFSIPRGTITALIGINGAGKSTLFKAIMGFVPLAEGSISIFNNPVINAL
KKNFVAYVPQSEEVDWHFPILVKDVVMMGRYGHMNWLRIPSTQDHRIVNEALERVNMNSMYKNQIGELSGGQKKRVFLAR
ALAQQGKIILLDEPFTGVDFKTEEEIISLMKELREEGKIILVSTHNIDSVPYFCDRVVFIKKTIISFGLTHEKFNQKNFV
STFGGISKHLMQINISNPNQQYRNLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-75 60
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-76 60
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-76 60
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-76 60
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-75 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B488_10150 YP_007233262.1 Manganese ABC transporter ATP-binding protein SitB BAC0350 Protein 3e-76 60
B488_10150 YP_007233262.1 Manganese ABC transporter ATP-binding protein SitB BAC0440 Protein 3e-73 60
B488_10150 YP_007233262.1 Manganese ABC transporter ATP-binding protein SitB BAC0400 Protein 4e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B488_10150 YP_007233262.1 Manganese ABC transporter ATP-binding protein SitB VFG0526 Protein 3e-76 60