Gene Information

Name : B479_27024 (B479_27024)
Accession : YP_007232197.1
Strain :
Genome accession: NC_019906
Putative virulence/resistance : Unknown
Product : TnpR2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 37169 - 37735 bp
Length : 567 bp
Strand : +
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
ATGGCACTGATCGGCTATGCGCGGGTATCGACGGCGGAACAGGACACCGCCTTGCAGACGGATGCGCTACGCAAGGCAGG
CTGCGAGCGCGTTTTCGAGGACACGGCTTCCGGGGCCAAGGCCGACCGCCCCGGCTTGGCTGATGCGCTGGCCTACCTGC
GCGACGGCGACGTGCTGGCCGTCTGGCGGCTGGATCGGCTCGGGCGCTCTATGCCGCACCTAATCGAAACGATAGGCGCG
CTGGAAGCGCGAGGCGTCGGCTTCCGTTCTCTGACGGAAGCCATCGACACCACCACGCCAGGCGGGCGGCTCATCTTCCA
CGTGTTCGGCGCGCTGGGCCAGTTCGAGCGCGACTTGATCCGCGAGCGCACCAAGGCCGGGTTGACTGCCGCCGCCGCTC
GTGGGAGGAAGGGCGGGCGAAAGCCGGTTGTCACCGCCGACAAGTTGCAGCGAGCGCGGGAGCACATCGCCAACGGGCTT
AATGTCCGAGAGGCCGCTACACGGCTCAAGGTGAGCAAGACGGCCCTGTACACCGCGCTGCAATCCACCAGTGCAGCCGA
CTCCTGA

Protein sequence :
MALIGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRDGDVLAVWRLDRLGRSMPHLIETIGA
LEARGVGFRSLTEAIDTTTPGGRLIFHVFGALGQFERDLIRERTKAGLTAAAARGRKGGRKPVVTADKLQRAREHIANGL
NVREAATRLKVSKTALYTALQSTSAADS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 8e-36 56
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 3e-32 51
res AGF34985.1 resolvase Not tested SGI1 Protein 3e-32 51
res AGF35025.1 resolvase Not tested SGI1 Protein 3e-32 51
res AGF35059.1 resolvase Not tested SGI1 Protein 3e-32 51
res AGK06929.1 resolvase Not tested SGI1 Protein 3e-32 51
res AGK06966.1 resolvase Not tested SGI1 Protein 3e-32 51
res AGK07012.1 resolvase Not tested SGI1 Protein 3e-32 51
res AGK07070.1 resolvase Not tested SGI1 Protein 3e-32 51
res AAK02044.1 resolvase Not tested SGI1 Protein 3e-32 51
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 6e-31 46
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 9e-31 45
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 9e-31 45