Gene Information

Name : B479_04200 (B479_04200)
Accession : YP_007227699.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 956879 - 957847 bp
Length : 969 bp
Strand : -
Note : COG1683 Uncharacterized conserved protein

DNA sequence :
ATGCACGAATCATCCGCCCACAGCAAGCCGCGTATCGCCATCAGCGCCTGCCTGACCGGGCACAGCGTGCGCTATAACGG
CGGCCACAAGGCCTCCGACCTGTGCCGTATGCAACTCGAGGAACATTTCGACTGGTTGCCGGTATGCCCGGAGGTGGCCA
TCGGCCTGGGCGTGCCGCGCGACCCGATCCGCCTGGTCGGCGACCCCGAGCAGCCGGAAGTGGTAGGCACCCGCAACCCC
GGAATGGACCTGACCGGGCCGCTGCGCAGCTATGGCGAGCAAATGGCGGCGGAACTCGATGATATCTGCGGCTACATCTT
CATGCAGAAATCGCCTTCCTGTGGCCTGGAGCGGGTCAAGGTATACCAGGACAATGGCCACCCTGCCTTTCACGGTGGGC
GGGGAGTGTATGCCCAGGCGTTCTGCGCACGGCGGCCGGACCTGCCGGTAGAAGAAGAAGGCCGCCTGCACGACCCCGTA
CTGCGCGAGAACTTCATCAGCCGCGTGTACGCCTACGCCGACTGGCAGCGCCTGCTGGCCGAAGGCCTAAGCCGTGGCGC
TCTGGTGCGATTCCACTCACGCTACAAGTACCTGTTGATGGCCAACAACCCGCAGGCCTATCGCAGCCTCGGGCGCCTGC
TCGGCAGCATGAGCAAGGACGATGACCCGCAAAGCATCGGCCCGCGCTACTTCAGCCAGCTGATGCAGGCTCTGCGCCGC
TGTGCCAGCCGCGGCACTCATTGCAACGTGCTACAGCATCTGAGCGGCTACTTCAAGGACATCCTCACACGGCAGGACAA
AGCCGAGCTGCAGGCCATCATCGGCCAATACCAGCAAGGTGTAGTGCCGCTGGTAGTGCCGCTGACCCTGCTCAAGCACC
ATTTGCGCAAGCATCCCGATCCGTATCTGCAGCAGCAGGCATACCTCCAGCCGCACCCCGAGAGCCTGGGCCTGCGCAAT
GCCGTCTGA

Protein sequence :
MHESSAHSKPRIAISACLTGHSVRYNGGHKASDLCRMQLEEHFDWLPVCPEVAIGLGVPRDPIRLVGDPEQPEVVGTRNP
GMDLTGPLRSYGEQMAAELDDICGYIFMQKSPSCGLERVKVYQDNGHPAFHGGRGVYAQAFCARRPDLPVEEEGRLHDPV
LRENFISRVYAYADWQRLLAEGLSRGALVRFHSRYKYLLMANNPQAYRSLGRLLGSMSKDDDPQSIGPRYFSQLMQALRR
CASRGTHCNVLQHLSGYFKDILTRQDKAELQAIIGQYQQGVVPLVVPLTLLKHHLRKHPDPYLQQQAYLQPHPESLGLRN
AV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 5e-59 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 5e-59 43
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 4e-59 43
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-59 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-59 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_04200 YP_007227699.1 hypothetical protein VFG0490 Protein 2e-59 43