Gene Information

Name : B479_03745 (B479_03745)
Accession : YP_007227608.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.48
Position : 855828 - 857099 bp
Length : 1272 bp
Strand : +
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAACAAGAACGAGAAATTCGAGGGCAATGCAGCGGCCGGTATCGGTACGCGTGTGGTGTGGAGCGGGGAGCAGGTTCA
GCATCCGTACAACGCTACCCAGACCCCGATCGTGGTCAGTGCCGCCTACGGCTACAACGACATCGATGCCTGGTACGACG
TGGCGCAGGGCAAGCTGCCCGGCTACATCTACAGCCGCATGAGCAACCCGACAGTCGCTACCCTGGAAGCCAAGCTCTGC
GAGCTGGAGCAGTCCGAGTCGGCGGTGGCATTCAGCAGCGGCATGGCTGCCATCAGTGCCGTGCTGCATACCTTCCTCTC
AAGCGGCAAGCGTGTGGTATCGACCCGCGACAGTTACGGCGGTACCAACAAGATCTTCGAAGAGTTCCTGCCGCGCATGG
GTGTGCAGGTCTGCCTGTGCGACACCCTCGACACCGAAGCGCTGGAGCGCGAGATCGCCGCGGGTTGCGACCTGCTGTAT
CTGGAAACCCCTACCAACCCCACCCTCAAGGTACTGGACATCCAGCGCCTGAGCGCTGCCGCCCGGAAGGCTGGCGCCGT
GGTGGTGGCCGACAACACCTTCGCCACCCCGCTGAACCAGAACCCGCTGGCCCTGGGCGTGGATGTGGTGGTGCACAGTG
CCACCAAATTCCTGTCCGGGCACGGTGATGTACTGGGCGGGGTGGTGTGCGGTGCCGAGTCGTTGATGGCCCAGGTGCGC
CACTACCGCGAGATCAACGGTGCGGCGCTGGACCCGTTTTCCGCCTACCTGATCATCCGCGGTATCAAGACCCTGGCCCT
GCGCCTGCGTCAGCAACAGGCCAGTGCCCAGGCCCTGGCGCATTACCTGACTACCGAACCGCTGGTCGAAGCGGTCAACT
ACCCGGGGTTGCCCCAGCATCCGGGCCATGCGATCGCCAAGGCGCAGATGCGTGGCTTCGGCGCCATTGTCAGCTTCGTG
CTCAAAGGCGGCATGCCCACCGTAGCGCGGCTGCTGCCGCGCCTGAAGTACGCCCATCGGGCGGGCAACCTGGGCGCGGT
AGAAACCATCTACGGCCCGGCGCGTACCACCAGCCATGTGGAAAACACCCTCGAAGAACGGCTGGCCCTGGGCATTTCCG
AAGGGCTGGTGCGCATTTCGGTGGGCATCGAGGACACCGAGGACCTGCTGGCAGACCTGGCACAGGCCTGTGCATCGGTG
CGCCAGGAGTTGGCCGCAGCAAAGGAATTGCACGGTGACGAAGACGCCTGCCTGGCCGAAGCACAGGCCTGA

Protein sequence :
MNKNEKFEGNAAAGIGTRVVWSGEQVQHPYNATQTPIVVSAAYGYNDIDAWYDVAQGKLPGYIYSRMSNPTVATLEAKLC
ELEQSESAVAFSSGMAAISAVLHTFLSSGKRVVSTRDSYGGTNKIFEEFLPRMGVQVCLCDTLDTEALEREIAAGCDLLY
LETPTNPTLKVLDIQRLSAAARKAGAVVVADNTFATPLNQNPLALGVDVVVHSATKFLSGHGDVLGGVVCGAESLMAQVR
HYREINGAALDPFSAYLIIRGIKTLALRLRQQQASAQALAHYLTTEPLVEAVNYPGLPQHPGHAIAKAQMRGFGAIVSFV
LKGGMPTVARLLPRLKYAHRAGNLGAVETIYGPARTTSHVENTLEERLALGISEGLVRISVGIEDTEDLLADLAQACASV
RQELAAAKELHGDEDACLAEAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_03745 YP_007227608.1 cystathionine gamma-synthase BAC0207 Protein 1e-51 41