Gene Information

Name : B479_03610 (B479_03610)
Accession : YP_007227581.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 825459 - 828023 bp
Length : 2565 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGCGAATAGACCGTTTGACCAGCAAGCTGCAGCTTGCGATATCCGATGCCCAATCCCTGGCGGTTGGCATGGATCACCC
TGCCATCGAGCCGGTGCACCTGTTGCAGGCACTGCTCGAGCAGCAGGGCGGTTCGATCAAGCCGCTGCTGATGCAGGTAG
GCTTCGACATCAACAGCCTGCGCCAGGCACTGGTGAAAGAACTCGACCAGCTGCCGAAAATCCAGAACCCCACCGGCGAC
GTAAACATGTCGCAGGACCTGGCGCGCCTGCTCAACCAGGCCGACCGCCTGGCCCAGCAGAAGGGCGACCAGTTCATTTC
CAGCGAACTTGTGCTGCTGGCTGCCATGGACGAGAACAGCAAGCTCGGCAAGCTGTTGTTGAGCCAGGGCGTGAGCAAGA
AGGCCCTGGAAAACGCCATCAACAACCTGCGCGGCGGTGCGGCGGTCAATGACGCCAACGCCGAGGAATCGCGCCAGGCG
CTGGACAAGTACACCGTCGACCTGACCAAGCGTGCCGAAGAAGGCAAACTGGACCCGGTGATTGGCCGTGACGACGAAAT
TCGCCGTACCGTACAGGTGCTGCAACGCCGTACCAAGAACAACCCGGTGCTGATCGGTGAGCCTGGCGTAGGTAAAACCG
CCATCGCCGAAGGCCTGGCCCAGCGCATCATCAATGGTGAAGTGCCGGACGGCCTCAAGGGCAAGCGCCTGCTGGCGCTG
GACATGGGCGCGCTGATTGCCGGTGCCAAGTACCGCGGCGAGTTCGAAGAACGCCTCAAAGGCCTGCTGAACGAGCTGTC
CAAGCAGGAAGGCCAGATCATCCTGTTCATCGACGAACTGCACACCATGGTCGGCGCCGGCAAGGGTGAGGGCGCCATGG
ACGCCGGCAACATGCTCAAGCCGGCCCTGGCTCGTGGCGAGCTGCACTGCGTTGGCGCCACCACGCTGAACGAGTACCGC
CAGTTCATCGAAAAGGATGCTGCCCTGGAGCGCCGCTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCAT
CGCCATCCTGCGGGGCCTGAAAGAGCGCTATGAAGTGCACCACAAGGTTGCCATCACCGACGGCGCCATCATTGCTGCGG
CCAAGCTCAGCCACCGCTACATCACTGACCGTCAGCTGCCGGACAAGGCCATTGACCTGATCGACGAAGCGGCCAGCCGC
ATCCGCATGGAGATCGACTCCAAGCCGGAAGTGCTCGACCGCCTCGACCGTCGCCTGATCCAGCTGAAGGTGGAGTCGCA
GGCGCTGAAGAAGGAAGAAGACGAAGCGGCGAAAAAGCGCCTGGAGAAGCTGACCGAGGAAATCGACCGGTTGGAGCGTG
AATATGCCGACCTGGAAGAAATCTGGGCCTCCGAGAAGGCTGAGGTGCAGGGCTCGGCGCAGATCCAGCAAAAGATCGAG
CAGGCCCGCCAGGAGCTGGAGACCGCCCGTCGCAAAGGCGACCTGAGCCGCATGGCCGAGCTGCAGTACGGGGTGATCCC
GGACTTGGAGCGTAGCCTGCAGATGGTCGACCAGCACGGCAAGACCGAAAACCAGTTGCTGCGCAATAAGGTCACCGAGG
AAGAAATTGCGGAAGTGGTCTCGAAGTGGACCGGTATCCCGGTGGCCAAGATGCTCGAAGGCGAGCGTGAAAAGCTGCTG
AAGATGGAAGAGCTGCTGCACCAGCGTGTGATCGGCCAGAACGAGGCGGTAACCGCCGTGGCCAACGCGGTGCGCCGTTC
GCGTGCCGGGCTGTCCGACCCGAACCGGCCGAGTGGTTCGTTCCTGTTCCTCGGCCCGACCGGGGTGGGCAAGACCGAGC
TGTGCAAGGCGCTGGCCGAGTTCCTGTTCGACACCGAAGAGGCAATGGTGCGCATCGACATGTCCGAGTTCATGGAGAAG
CATTCCGTGGCTCGCCTGATCGGTGCCCCACCAGGCTATGTGGGGTATGAAGAGGGCGGTTACCTGACCGAGGCGGTACG
GCGCAAGCCATACTCGGTGGTGCTGCTGGACGAGGTGGAGAAGGCCCACCCGGATGTGTTCAACGTGCTGCTGCAGGTGC
TGGAAGACGGCCGCCTGACCGACAGCCACGGGCGCACCGTGGACTTCCGCAACACCGTGATCGTGATGACCTCCAACCTG
GGCTCGGCGCAGATCCAGGAACTGGTGGGTGACCGTGAGGCACAGCGTGCGGCGGTGATGGATGCGGTGGGTTCGCACTT
CCGTCCGGAATTCATCAACCGTATCGACGAAGTGGTGGTGTTCGAGCCACTGGGCCGCGAGCAGATTGCCGGCATTACCG
AAATCCAGCTGGGCCGCCTGCGCAGCCGTCTGCTGGAGCGCGAACTGTCGCTGAGCCTGAGCCCGGAGGCATTGGACAAG
CTGATTGCCGTGGGTTACGACCCGGTATACGGCGCACGGCCACTGAAGCGGGCGATCCAGCGCTGGATCGAAAACCCGTT
GGCGCAGTTGATCCTGGCAGGCAAGTTCATGCCGGGCACGGCGATTACCGCCAAGGTGGAAGGCGACGAAATCGTCTTCG
GCTGA

Protein sequence :
MRIDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINSLRQALVKELDQLPKIQNPTGD
VNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLGKLLLSQGVSKKALENAINNLRGGAAVNDANAEESRQA
LDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLAL
DMGALIAGAKYRGEFEERLKGLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYR
QFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR
IRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIDRLEREYADLEEIWASEKAEVQGSAQIQQKIE
QARQELETARRKGDLSRMAELQYGVIPDLERSLQMVDQHGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLL
KMEELLHQRVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEK
HSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL
GSAQIQELVGDREAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDK
LIAVGYDPVYGARPLKRAIQRWIENPLAQLILAGKFMPGTAITAKVEGDEIVFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-150 44