Gene Information

Name : B479_03230 (B479_03230)
Accession : YP_007227505.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 734309 - 735829 bp
Length : 1521 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence : 
ATGCGTTACGCACATCCCGGTACCGAAGGCGCGAAGGTTTCCTTCAAGAGCCGCTACGGCAACTACATCGGTGGTGAGTT
CGTTCCTCCGGTAAAGGGGCAGTACTTCGAAAATACCTCCCCGGTGAATGGCAAGCTGATCGCTGAATTCCCTCGCTCCA
CTGCCGAAGACATCGATAAAGCCCTGGATGCAGCCCACGCTGCGGCCGACGCCTGGGGCCGCACTTCAGTGCAGGACCGC
TCCAACGTTCTGCTGAAGATCGCCGACCGTATCGAGCAGAACCTCGAACTGCTGGCCATTACCGAAACCTGGGACAACGG
CAAGCCGATCCGCGAAACCCTCAATGCCGACATTCCGCTGGCGGTCGACCACTTCCGCTACTTCGCTGGCTGCATCCGCG
CCCAGGAAGGCGGCGCCGCGGAAATCAACGAAGGCACCGTGGCCTACCACATCCATGAGCCACTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCCGCCTGGAAGCTCGCCCCGGCACTGGCCGCCGGCAACTGCGTGGTGCT
CAAGCCAGCCGAACAGACCCCGCTGGGCATCACCGTGCTGCTGGAAGTGATCGGTGACCTGCTGCCACCTGGTGTGCTCA
ACGTGGTGCAAGGCTATGGCCGCGAAGCCGGTGAAGCACTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCGACCCCGGTGGGCTCGCACATCATGAAATGCGCCGCCGAGAACATCATCCCGTCCACCGTCGAACTGGGCGGCAAGTC
GCCGAACGTGTATTTCGAAGACATCATGCAAGCCGAACCAAGCTTCATCGAGAAGGCGGCCGAAGGCATGGTGCTGGCGT
TCTTCAACCAGGGCGAGGTATGCACCTGCCCGTCACGGGCACTGGTGCAGGAGTCGATCTACCCGCAGTTCATGGAAGTG
GTGATGAAGAAGGTGCTGCAGATCAAGCGCGGCGACCCGCTGGACACTGACACCATGGTCGGAGCGCAGGCCTCGCAACA
GCAGTTCGAGAAGATCCTGTCGTACCTGGATATCGCCCAGAAGGAAGGCGCCGAGTTGCTGACCGGCGGCAAGGTCGAAA
AACTGGAGGGCTCGCTGGCCACCGGTTACTACATCCAGCCGACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTCAGCGTCACCACCTTCAAGGACGAAGCCGAAGCCCTGGCGATCGCCAACGACACCGA
GTTCGGCCTGGGCGCCGGCGTGTGGACCCGCGACATCAACCGTGCCTACCGCGTGGGCCGTGGGATCAAGGCTGGCCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCCGCGTTCGGTGGCTACAAGAAGTCGGGGGTCGGGCGTGAGACG
CACAAGATGATGCTCGACCACTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGTTGGGCTTCTTCTA
A

Protein sequence : 
MRYAHPGTEGAKVSFKSRYGNYIGGEFVPPVKGQYFENTSPVNGKLIAEFPRSTAEDIDKALDAAHAAADAWGRTSVQDR
SNVLLKIADRIEQNLELLAITETWDNGKPIRETLNADIPLAVDHFRYFAGCIRAQEGGAAEINEGTVAYHIHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLLEVIGDLLPPGVLNVVQGYGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNVYFEDIMQAEPSFIEKAAEGMVLAFFNQGEVCTCPSRALVQESIYPQFMEV
VMKKVLQIKRGDPLDTDTMVGAQASQQQFEKILSYLDIAQKEGAELLTGGKVEKLEGSLATGYYIQPTLLKGNNKMRVFQ
EEIFGPVVSVTTFKDEAEALAIANDTEFGLGAGVWTRDINRAYRVGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-149 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-157 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-157 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-157 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-156 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_03230 YP_007227505.1 aldehyde dehydrogenase VFG0082 Protein 1e-149 66