Gene Information

Name : B479_26595 (B479_26595)
Accession : YP_007232149.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : UspA, universal stress protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5870414 - 5871265 bp
Length : 852 bp
Strand : -
Note : COG0589 Universal stress protein UspA and related nucleotide-binding proteins

DNA sequence :
ATGACCCACGTAATTGCCTGTATCGACGGTTCCACCTCGGCTCCAGCTGTTTGCGACTACGCGGCCTGGGCCAGTCTGAG
CCTGGAAGCGCCGCTGACCTTCCTGCATGTGCTGGATCAGCGCCAGTATCCGGTTGCAGCAGATTTGAGTGGCAACATTG
GCCTTGGCAGCCGCGAGCACCTGCTTGATGAGCTTGCTTCCCTGGATGAACAGCGCGGCAAGTTGGCCCTTGAACAAGGG
CGAATCATGCTTGCAGCCGCGAAAGAACGGGCCGTGAATGATGGTGTGCGCGCACCGGAGTCCAAGCAGCGACATGGCGA
TTTACTGGAGAGCTTGCAAGAGCTGCAAAGTGAAACGCGCTTGCTGGTTATCGGTCGCCAGGGCGAGTCTAGTGGCGGTC
TGAGTCAGCATGTCGGAAGCCAGCTGGAAAGCGTTATTCGTATCATGCACCGGCCAATCCTGGTCACCCCGGCCAACTTC
CAAAAGCCCAAGAGCGCGATGCTGGCATTCGATGGCGGCGCTACAACCCGCAAGGGTGTGGAGATGCTGGCAGCCAGCCC
GCTGCTGAAGGGGCTGCCGATCCATCTGGTCATGGTTGGGCCCGTGAACGACGAAGCGTCCGCGCAGCTGGACTGGGCGC
AGAAAGTGCTGATCAACGCCGGATTTACCGTTCGCGCTGAGACTCGGAGCGGTGAAATAGAACGTACCCTGCACGCCTAT
CAGAAAGAGCATGGCATCGATCTGCTAGTGATGGGGGCTTATGGACACTCACGTATCCGGCAGTTCCTGGTCGGCAGCAC
CACTACCAGCATGCTCCGTACCACCACCAGTCCGCTGTTACTGCTGCGCTAA

Protein sequence :
MTHVIACIDGSTSAPAVCDYAAWASLSLEAPLTFLHVLDQRQYPVAADLSGNIGLGSREHLLDELASLDEQRGKLALEQG
RIMLAAAKERAVNDGVRAPESKQRHGDLLESLQELQSETRLLVIGRQGESSGGLSQHVGSQLESVIRIMHRPILVTPANF
QKPKSAMLAFDGGATTRKGVEMLAASPLLKGLPIHLVMVGPVNDEASAQLDWAQKVLINAGFTVRAETRSGEIERTLHAY
QKEHGIDLLVMGAYGHSRIRQFLVGSTTTSMLRTTTSPLLLLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
uspA AEO37451.1 universal stress protein A Not tested AbaR4 Protein 1e-54 48
BJAB07104_00258 YP_008207723.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR25 Protein 1e-54 48
uspA AEQ20902.1 universal stress protein A Not tested Tn6166 Protein 1e-54 48
BJAB07104_00274 YP_008207739.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR25 Protein 1e-54 48
uspA AEZ06029.1 universal stress protein A Not tested Tn6167 Protein 1e-54 48
BJAB0868_00262 YP_008211588.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR26 Protein 1e-54 48
uspA AFH57199.1 universal stress protein Virulence AbaR4a Protein 8e-55 48
BJAB0868_00278 YP_008211604.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR26 Protein 1e-54 48
uspA AFV47946.1 universal stress protein A Virulence AbaR25 Protein 8e-55 48
ABZJ_00238 YP_005524194.1 Universal stress protein Not tested AbaR22 Protein 1e-54 48
uspA AFV47966.1 universal stress protein A Virulence AbaR25 Protein 8e-55 48
ABZJ_00257 YP_005524213.1 Universal stress protein Not tested AbaR22 Protein 1e-54 48
uspA AFV47977.1 universal stress protein A Virulence delta-AbaR25 Protein 8e-55 48
ABTW07_3868 YP_005797116.1 universal stress protein Not tested AbaR4e Protein 1e-54 48
uspA AFV47994.1 universal stress protein A Virulence delta-AbaR25 Protein 8e-55 48
ABTW07_3909 YP_005797157.1 universal stress protein Not tested AbaR4e Protein 1e-54 48
ABK1_0239 YP_005512811.1 Universal stress protein Not tested AbaR4d Protein 1e-54 48