Gene Information

Name : B479_26285 (B479_26285)
Accession : YP_007232087.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5801472 - 5803550 bp
Length : 2079 bp
Strand : +
Note : COG1200 RecG-like helicase

DNA sequence :
ATGAGTGAGCTGTCGAAGGTCCCGGTGACGGTACTCAAGGGGGTTGGCGAGGCCATGGCGGAGAAGCTCGCCAAGGTCGG
CCTGGAGAACCTGCAGGACGTGCTGTTCCACCTGCCCCTGCGCTACCAGGACCGCACCCGCGTGGTGCCGATCGGTCAAC
TGCGCCCTGGCCAGGACGCGGTGATCGAGGGCGTGGTCAGCGGCGCCGACGTGACCATGGGCAAGCGCCGCAGCCTGGTG
GTGCGCCTGGGTGACGGCAGCGGTGTGCTGAGCCTGCGCTTCTACCACTTCAGCAACGCGCAGAAGGAAGGCCTCAAGCG
TGGCACCCACCTGCGCTGCTACGGCGAAGCACGCCCCGGCGCTTCGGGCCTGGAAATCTACCACCCGGAATACCGGGCGC
TGAACGGCGACGAACCGCCGCCACCGGTCGAGCAGACCCTGACGCCGATCTATCCGTCCACCGAAGGCCTTACCCAGCAA
CGCCTGCGGCTGCTGTGTCAGCAGAGCCTGGGCCTGCTGGGCCCGCGCAGTCTGCCGGACTGGCTGCCCGACGAACTGGC
CCGGGACTACCAACTGGCGCCGCTGGACGATGCCATCCGCTACCTGCACAACCCGCCGGCCGATGCCGACCTCGACGAGC
TTGCCGAAGGCCAGCACTGGGCCCAGCACCGCCTGGCCTTCGAAGAGCTGCTGACCCACCAGTTGTCGCAGCAACGCCTG
CGTGAAAGCCTGCGCAGCCTGCGCGCGCCAGTGCTGCCCAAAGCCCAGCGCCTGCAGGCACAGTACCTGGCCAACTTGGG
TTTCCAGCCGACCGGCGCACAGCAGCGGGTGGCCAACGAAATTGCTTACGACCTCAGCCAGCAAGAGCCGATGATGCGCC
TGGTGCAGGGCGATGTGGGTGCCGGCAAGACCGTGGTCGCCGCCCTGGCCGCGCTGCAGGCCTTGGAAGCCGGCTACCAG
GTGGCCCTGATGGCACCCACCGAGATCCTCGCCGAACAGCACTACATCACCTTCAAGCGCTGGCTCGAACCGCTGGGCAT
CGAAGTCGCGTGGCTGGCCGGCAAGCTAAAGGGCAAAGCCCGGGCAGCCGCCCTGGAGCAGATCGCCAATGGCGCGCCAA
TGGTGGTCGGCACCCATGCGCTGTTCCAGGAAGAGGTGAAGTTCAAGCACCTGGCCCTGGCGATCATCGATGAACAGCAC
CGTTTTGGCGTGCAGCAACGCCTGGCCCTGCGCAAGAAGGGCGTGGCCGGGGAATTGTGCCCGCACCAGCTGATCATGAC
CGCCACACCCATTCCGCGCACCTTGGCCATGAGCGCCTACGCCGACCTGGACACCTCGGTGCTCGACGAACTGCCACCCG
GACGCACCCCGGTGAACACCGTGCTGGTGGCCGATAGCCGCCGCTTCGAAGTGGTCGAGCGGGTGCGCGCCGCCTGCGCC
GAAGGGCGCCAGGCCTACTGGGTGTGCACACTGATCGAAGAATCCGAAGAGCTTACCTGCCAGGCCGCCGAAAGCACCTA
CGAGGAGCTGGGCAGCGCCTTGGGCGAGCTGCGGGTGGGGCTGATCCACGGGCGCATGAAGCCGGCGGAAAAAGCTGAGA
TCATGGCTGAGTTCAAGGCCGGCAACCTGCAGTTGCTGGTCGCCACCACGGTCATCGAGGTGGGCGTGGATGTGCCCAAC
GCCAGCCTGATGATCATCGAGAACCCAGAGCGCCTGGGCCTGGCACAGTTGCACCAGTTGCGTGGCCGGGTTGGCCGGGG
CAGCGCCGTCAGCCATTGCGTGCTGCTGTACCACCCGCCACTGTCGCAGATCGGCCGCGAGCGGCTAGGGATCATGCGGG
AAACCAACGACGGCTTCATCATCGCCGAAAAGGACCTGGAGCTGCGTGGCCCGGGCGAGATGCTCGGCACCCGCCAGACA
GGCCTGTTGCAGTTCAAGGTCGCCGACCTGATGCGTGACGCCGACCTGCTGCCGGCCGTGCGCGACGCCGCCCAGGCCCT
GATCGCACGCTGGCCGGAGCACGTCAGCCCGCTGCTCGATCGCTGGCTGCGTCATGGCCAGCAATATGGCCAAGTGTGA

Protein sequence :
MSELSKVPVTVLKGVGEAMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVPIGQLRPGQDAVIEGVVSGADVTMGKRRSLV
VRLGDGSGVLSLRFYHFSNAQKEGLKRGTHLRCYGEARPGASGLEIYHPEYRALNGDEPPPPVEQTLTPIYPSTEGLTQQ
RLRLLCQQSLGLLGPRSLPDWLPDELARDYQLAPLDDAIRYLHNPPADADLDELAEGQHWAQHRLAFEELLTHQLSQQRL
RESLRSLRAPVLPKAQRLQAQYLANLGFQPTGAQQRVANEIAYDLSQQEPMMRLVQGDVGAGKTVVAALAALQALEAGYQ
VALMAPTEILAEQHYITFKRWLEPLGIEVAWLAGKLKGKARAAALEQIANGAPMVVGTHALFQEEVKFKHLALAIIDEQH
RFGVQQRLALRKKGVAGELCPHQLIMTATPIPRTLAMSAYADLDTSVLDELPPGRTPVNTVLVADSRRFEVVERVRAACA
EGRQAYWVCTLIEESEELTCQAAESTYEELGSALGELRVGLIHGRMKPAEKAEIMAEFKAGNLQLLVATTVIEVGVDVPN
ASLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPLSQIGRERLGIMRETNDGFIIAEKDLELRGPGEMLGTRQT
GLLQFKVADLMRDADLLPAVRDAAQALIARWPEHVSPLLDRWLRHGQQYGQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-93 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_26285 YP_007232087.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 87