Gene Information

Name : B479_26140 (B479_26140)
Accession : YP_007232058.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5774001 - 5775494 bp
Length : 1494 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGACCACCCTGACTCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGA
ATACACCGATGCCGCATCTGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCT
GCGATCTGGCCGATGCCAACCGCGCTGTGGAAAACGCCCGTGCCACCTTCAACTCCGGCGTGTGGTCGCAGCTGGCCCCG
GCCAAGCGCAAGGCCAAGCTGATCCGCTTCGCCGACCTGCTGCGCAAGAACGTCGAAGAGCTGGCGCTGCTGGAAACCCT
GGACATGGGCAAGCCGATCGGCGACTCCTCCAGCATCGACGTACCTGGCGCGGCCAATGCCATCCACTGGACTGCCGAAG
CCATCGACAAGGTCTACGACGAAGTCGCCCCGACCCCGCATGACCAGCTCGGCCTGGTCACCCGCGAAGCGGTGGGTGTG
GTCGGTGCCATCGTACCGTGGAACTTCCCGCTGCTGATGGCCTGCTGGAAGCTCGGCCCGGCCTTGGCCACCGGTAACTC
GGTAGTGCTCAAGCCGTCCGAAAAGTCGCCGCTGACGGCCATTCGCATCGCCCAGCTGGCCATCGAAGCCGGTATCCCGG
CTGGCGTGCTGAACGTGCTGCCAGGCTACGGCCACACCGTGGGTAAGGCCCTGGCCCTGCACATGGACGTCGACACCCTG
GTATTCACCGGTTCGACCAAGATCGCCAAGCAGCTGATGGTTTACGCGGGCGAATCGAACATGAAGCGCATCTGGCTGGA
AGCCGGCGGCAAGAGCCCGAACATCGTCTTCGCTGACGCTCCGGACCTGCAAGCTGCCGCCGAAGCTGCCGCCAGCGCCA
TCGCCTTCAACCAGGGCGAAGTGTGCACCGCCGGCTCGCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCG
ATGGTGGTCGAGGCCCTGAAAGGCTGGAAGCCAGGCAACCCGCTGGACCCACAGACCACCGTCGGTGCCCTGGTCGACAC
CCAGCAGATGAACACCGTGCTGTCGTACATCGAGGCTGGCCACAAGGACGGCGCCAAGCTGCTGGCTGGCGGCAAGCGCA
CCCTGGAAGAAACCGGTGGCACTTATGTCGAGCCGACCATCTTCGACGGCGTGACCAACGCCATGAAGATCGCCCAGGAA
GAAATCTTCGGCCCGGTGCTGTCGGTGATCGCCTTCGATACCGCCGAAGAAGCCGTCGCCATTGCCAACGACACGCCGTA
TGGCCTGGCCGCTGGCATCTGGACTTCGGACATCTCCAAGGCCCACAAGACCGCCCGCGCCGTGCGCGCTGGCAGCGTCT
GGGTCAACCAGTACGACGGCGGCGACATGACCGCGCCGTTCGGTGGCTTCAAGCAGTCGGGCAACGGCCGTGACAAGTCG
CTGCATGCGCTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGTTGTAA

Protein sequence :
MTTLTRADWEQRAQQLKIEGRAFINGEYTDAASGETFECLSPVDGRFLAKVASCDLADANRAVENARATFNSGVWSQLAP
AKRKAKLIRFADLLRKNVEELALLETLDMGKPIGDSSSIDVPGAANAIHWTAEAIDKVYDEVAPTPHDQLGLVTREAVGV
VGAIVPWNFPLLMACWKLGPALATGNSVVLKPSEKSPLTAIRIAQLAIEAGIPAGVLNVLPGYGHTVGKALALHMDVDTL
VFTGSTKIAKQLMVYAGESNMKRIWLEAGGKSPNIVFADAPDLQAAAEAAASAIAFNQGEVCTAGSRLLVERSIKDKFLP
MVVEALKGWKPGNPLDPQTTVGALVDTQQMNTVLSYIEAGHKDGAKLLAGGKRTLEETGGTYVEPTIFDGVTNAMKIAQE
EIFGPVLSVIAFDTAEEAVAIANDTPYGLAAGIWTSDISKAHKTARAVRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHALEKYTELKATWIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-133 59
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-75 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 9e-76 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 9e-76 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 9e-76 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_26140 YP_007232058.1 aldehyde dehydrogenase VFG0082 Protein 3e-75 42