Gene Information

Name : B479_25925 (B479_25925)
Accession : YP_007232017.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : transposition helper protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5720381 - 5721271 bp
Length : 891 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGACTGAGTACGCACACCTCCACGCCGACTTCAGGCCTGTGCTGCAGCTTTCCGCCCGAGAGCGTATTCGCTTCATGGG
CGAGCCTCGTTGGATTGGCTACAAGGCTGCTCATCACATTCTAGATAGCCTTGAGTGCCTACTTGATGCTCCCAAGCGAC
CTCGAATGCCTAACATGCTCATTGTCGGTGACCCAAACAACGGTAAGACCACCATCGTTCGGCATTTTGAGAAGACGCAT
GGTGAGGGCTACGTTGACGAGAACTCCGAGCCTGTGCGGCCGATAATCTTGGCCGAGGCGCCGCCATCTGCTGAAGAGAA
AGATCTCTACATTGCGATTCTTGATCGCATGTGGATGCCTTACAAGACCACCGATTCCAAGGTCACGCTGAGGTTCCAGG
TCATTCACGCGCTGCGAGAGCTAAAAGTGCGTATGTTGATCATCGATGAGGTTCACTCGATGCTCACAGGCTCCGCCACA
AAACAGCGGGAAGTCATGAACGCCCTCAAGATGTTGTGTAACACACTGATGATCCCGATCGTTGGCGTGGGCACTCCAAA
TGCAGTGCAGATCCTGCACCTAGATCCGCAGCATGCCAGTCGTTTTGACGTCATCAAGTTGGAAACCTGGAAGCTGAATG
CGGATTTCCAACGCTTGCTTAAGGCATTCGAGGCCGTGTTGCCGTTGAAGAAGGCCTCTGAACTCTACAAGCCGGAGCTT
GCCCAGCTGATCCATTCCATTTCGGGTGGCAATACGGGGGATTTACACGGCTTGCTGCTCGAATGTGCCACGGAAGCTAT
TAACTCTGGGAAGGAATGCATCGATCGACAGCTCATTGAGAGTAAGTCGTGGAAACGTCCTACACGTGGCATCCGGGAGC
GCGTTGTGTAA

Protein sequence :
MTEYAHLHADFRPVLQLSARERIRFMGEPRWIGYKAAHHILDSLECLLDAPKRPRMPNMLIVGDPNNGKTTIVRHFEKTH
GEGYVDENSEPVRPIILAEAPPSAEEKDLYIAILDRMWMPYKTTDSKVTLRFQVIHALRELKVRMLIIDEVHSMLTGSAT
KQREVMNALKMLCNTLMIPIVGVGTPNAVQILHLDPQHASRFDVIKLETWKLNADFQRLLKAFEAVLPLKKASELYKPEL
AQLIHSISGGNTGDLHGLLLECATEAINSGKECIDRQLIESKSWKRPTRGIRERVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tniB ADZ05761.1 transposition helper protein Not tested AbaR11 Protein 2e-57 46
tniB AFH57218.1 putative transposase Not tested AbaR4c Protein 2e-57 46
tniB AFV47962.1 transposition protein TniB Not tested AbaR25 Protein 2e-57 46
BJAB07104_00250 YP_008207715.1 putative ATPase, putative transposase Not tested AbaR25 Protein 3e-57 46
tniB AFV47990.1 transposition protein TniB Not tested delta-AbaR25 Protein 2e-57 46
BJAB0868_00257 YP_008211583.1 putative ATPase, putative transposase Not tested AbaR26 Protein 3e-57 46
ABZJ_00232 YP_005524188.1 putative transposition helper protein Not tested AbaR22 Protein 3e-57 46
tniB AEO37450.1 TniB transposition protein Not tested AbaR4 Protein 3e-57 46
tniB AFC76427.1 TniB Not tested AbaR5 Protein 3e-57 46
1_17 CAJ77012.1 Transposition Helper Not tested AbaR1 Protein 2e-57 46
ABZJ_00251 YP_005524207.1 putative transposition helper protein Not tested AbaR22 Protein 1e-56 46