Gene Information

Name : B479_25185 (B479_25185)
Accession : YP_007231869.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5568352 - 5568795 bp
Length : 444 bp
Strand : +
Note : COG0789 Predicted transcriptional regulators

DNA sequence : 
ATGAAGATCGGAGAACTGGCCAAAGCCACCGACTGCGCCGTGGAAACCATCCGCTACTACGAGCGTGAACAGCTGCTGCC
GGAGCCGGCACGCAGCGACGGCAACTACCGGCTGTACACCCAGGCCCACGTCGAGCGGCTTACCTTCATCCGCAACTGCC
GCACCCTGGACATGACCCTGGATGAAATCCGCAGCCTGCTACGCCTGCGCGACAGCCCCGATGATTCGTGCGGCAGCGTC
AATGCGCTGATCGACGAACATATCGAGCATGTGCAGGCTAGGATCGATGGCCTGGTGGCGCTGCAGGAACAGCTGGTGGA
GCTGCGGCGGCGCTGCAATGCGCAAGGGGCGGAGTGTGCGATCTTGCAGCAACTGGAGACGAACGGGGCGGTATCGGTGC
CGGAAACCGAGCATTCGCATGTGGGGCGAAGTCATGGGCATTGA

Protein sequence : 
MKIGELAKATDCAVETIRYYEREQLLPEPARSDGNYRLYTQAHVERLTFIRNCRTLDMTLDEIRSLLRLRDSPDDSCGSV
NALIDEHIEHVQARIDGLVALQEQLVELRRRCNAQGAECAILQQLETNGAVSVPETEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 5e-36 55
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 6e-32 49
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 5e-32 49
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 4e-32 49
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 3e-32 49
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 4e-32 49
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 4e-32 49
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 3e-32 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_25185 YP_007231869.1 MerR family transcriptional regulator BAC0058 Protein 9e-65 100
B479_25185 YP_007231869.1 MerR family transcriptional regulator BAC0301 Protein 2e-34 58