|
Name : B479_24075 (B479_24075) Accession : YP_007231647.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 5301537 - 5303417 bp Length : 1881 bp Strand : - Note : COG0422 Thiamine biosynthesis protein ThiC DNA sequence : ATGACCAAACAAGAAAAAGCGATCAACCTCAGCGAATCGGCACAAGTCGATCAGCAGTCCGTGCAACCGTTTCCGCGTTC GCGCAAGGTGTATGTCGAAGGCTCGCGCCCGGACATCCGCGTGCCCATGCGTGAAATCAGCCTGGACGACACCCCGACCG ACTTCGGTGGCGAGTCCAATGCCCCGGTGCTGGTCTACGATACTTCCGGCCCGTACACCGACCCCAACGTTGTCATCGAC GTGCGCAAGGGCTTGGCCGATGTGCGTTCGGCGTGGATCGAGGCACGCGGTGACACCGAGCGCCTGGCCGGCCTGAGCTC CGACTTCGGCCAGCAGCGCCTGAACGATGCCGAACTGGCCAAGCTGCGTTTCGCCCACGTGCGCAACCCGCGCCGTGCCA AGGCTGGTGCCAACGTCTCGCAGATGCACTATGCCCGCCAAGGCATCATCACTGCCGAGATGGAGTACGTGGCCATCCGC GAAAACATGAAGCTGCAAGAGGCACGTGCCGCTGGTCTGCTCGACGAGCAGCACGCCGGCCACAGCTTCGGGGCCAACAT CCCGAAAGAAATCACCCCTGAGTTCGTCCGCCAGGAAATTGCCCGTGGCCGCGCGATCATCCCTGCCAACATCAACCACC CGGAAGTGGAACCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGCAACATCGGCAATAGCGCGCTGGGTTCC TCGATCGAGGAAGAAGTGGCCAAGCTGACCTGGGGCATCCGCTGGGGTTCGGACACGGTCATGGACCTGTCCACCGGCAA GCACATTCACGAAACCCGTGAGTGGATCATCCGCAACTCGCCGGTGCCGATTGGTACCGTGCCCATCTACCAGGCCCTGG AAAAGGTCAACGGCGTGGCCGAGGACCTGACCTGGGAGCTGTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTG GACTACTTCACCATCCATGCCGGCGTACTGCTGCGTTATGTGCCGCTGACTGCCAAGCGTGTCACCGGTATTGTCAGCCG TGGTGGCTCGATCATGGCCAAGTGGTGCCTGGCACACCACAAGGAAAACTTCCTGTACACCCACTTCGAAGAAATCTGCG AAATCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGCGACGGCCTGCGTCCCGGCTCGATTGCCGACGCCAACGATGCC GCGCAGTTCGGTGAACTGGAGACCCTCGGCGAGCTGACCAAGATCGCCTGGAAGCACGACGTGCAGTGCATGATCGAAGG CCCCGGCCACGTGCCGATGCAACTGATCAAGGAGAACATGGACAAGCAGCTGGAATGCTGCGACGAGGCGCCGTTCTACA CCCTCGGCCCGCTGACCACCGATATCGCTCCTGGCTACGATCACATCACCTCGGGCATTGGTGCGGCTATGATCGGCTGG TTCGGTTGCGCGATGCTCTGCTACGTCACGCCCAAGGAACACCTGGGCCTGCCAAACAAGGATGACGTGAAGACCGGCAT CATCACCTACAAGATCGCCGCTCATGCCGCCGACCTTGCCAAGGGCCACCCGGGTGCGCAGATCCGTGACAACGCCTTGT CCAAGGCACGCTTCGAGTTCCGTTGGGAAGACCAGTTCAACCTCGGCCTGGACCCGGACACTGCCCGTGCCTACCACGAC GAGACCCTGCCTAAGGAATCGGCCAAGGTCGCGCACTTCTGCTCGATGTGCGGGCCGAAGTTCTGCTCGATGAAGATCAC CCAGGAAGTGCGTGAATACGCCGCCAAGATCGAAACCGTGGATGTGACGGTAGAGCAAGGCATGCGTGAGCAGGCCGAGC GGTTCCGGCAGGAAGGCAGCCAGCTGTATCACAAAGTCTAA Protein sequence : MTKQEKAINLSESAQVDQQSVQPFPRSRKVYVEGSRPDIRVPMREISLDDTPTDFGGESNAPVLVYDTSGPYTDPNVVID VRKGLADVRSAWIEARGDTERLAGLSSDFGQQRLNDAELAKLRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIR ENMKLQEARAAGLLDEQHAGHSFGANIPKEITPEFVRQEIARGRAIIPANINHPEVEPMIIGRNFLVKINGNIGNSALGS SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWELFRDTLIEQAEQGV DYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEEICEIMKAYDVSFSLGDGLRPGSIADANDA AQFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAYHD ETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAAKIETVDVTVEQGMREQAERFRQEGSQLYHKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 78 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 78 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
