Gene Information

Name : B479_23140 (B479_23140)
Accession : YP_007231460.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5106067 - 5106942 bp
Length : 876 bp
Strand : +
Note : COG2378 Predicted transcriptional regulator

DNA sequence : 
ATGAAACGCAAGCAATCCATCGAACAGGTTCGCTGGGACCTAGCTCTTCGCTATCGTCTGATTGAAACCGTAGCCTGGTG
GGAAGGCCGGCTGACCACGGGACACCTGATCCAGAGCTTTGGCATCAGTCGGCAGCAGGCATCGAAAGACATCAATACCT
ACATCGCTGAGCATGCGCCCAAAAACCTTACATATGACAAGCAGATAAAAGGTTACGTGCCGAGCAAGACATTCAAACCG
CTGTTCATCGATGACAGCGCCAGCGCCTACCTGCACTTGCTGTATCAGAACAACGCACGCGCACCGCACGTCGAAGGCCT
GGCGCTGGCCTACGCTCATACCAAGGTGCTCGAAGTGCCAGACCGGTCGATCAAGGCCGAAGTTCTCCGGCCGCTGCTCA
AGGCTTGCCGCGACCATCTGAGACTGGACATCGACTACGTTTCACTCAATAGCCCGGAACCAGAAGGCCGAACAATCGCA
CCTCATACACTGGTGTACACCGGAATGCGGTGGCATGTACGAGCCTACTGTGAAAAAAACCGTCAGTACCGTGACTTCGT
GCTAAGCAGGCTACGAGGCGTACCCGACCTGCGTGACGAAGAAACTGAGAATGGTATTGCCGAGGACGATGATTGGAACA
CCGAGGCTCCGGTGATCATCAAGCCTGATGAGCGCCTGGATAAAGCACAGCGAATGATCATTGAGGTCGATTTCGGCATG
ACAGATGGGCGTCTGGTTGTTCCGAGTCGTAGAGCACTGGTGAAGTACGTATTGCAGCGTTTTCAAATCGATCCGAAAAA
TCTGAATCCTAACCCTGAGGCTCAGCAGATTGTGGTTGCCAACCTCAAGGAGTTGAAGCCGTGGTTATACGAATGA

Protein sequence : 
MKRKQSIEQVRWDLALRYRLIETVAWWEGRLTTGHLIQSFGISRQQASKDINTYIAEHAPKNLTYDKQIKGYVPSKTFKP
LFIDDSASAYLHLLYQNNARAPHVEGLALAYAHTKVLEVPDRSIKAEVLRPLLKACRDHLRLDIDYVSLNSPEPEGRTIA
PHTLVYTGMRWHVRAYCEKNRQYRDFVLSRLRGVPDLRDEETENGIAEDDDWNTEAPVIIKPDERLDKAQRMIIEVDFGM
TDGRLVVPSRRALVKYVLQRFQIDPKNLNPNPEAQQIVVANLKELKPWLYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 3e-67 50
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 3e-67 50
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 2e-66 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_23140 YP_007231460.1 transcriptional regulator VFG1105 Protein 1e-67 50