Gene Information

Name : B479_18085 (B479_18085)
Accession : YP_007230452.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3993566 - 3994579 bp
Length : 1014 bp
Strand : -
Note : COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins

DNA sequence :
ATGCCGTTCGATGCCGCATCACAGCCCCAGTCAGCGCCACGCTGGCGCAGCCTCAGTGCCGAGGAGGGGGACAGCTGGCT
GAGCCTGTCCCTCGAAGGCCGCGCGTTGATCCAGTTGCGCCTGGAGATGGGTGCTACTCTGCATGTCCACCTCGAGCGGC
TGTGCCCCGAGCGCCCCTATGTGGCCTTGTGGGCCGCCTGTTATTGGCTGCTGGCCCGCGATGCGGCCTGCCAGCGTCTT
GCCTGGCACCTGCCCGAGCCGTTGCCTCAGGCATTGACCAGTGGCCTGCTGCTGGCCGGCGAGCAGCCTGGCCAATACCT
GTGCGAGCGGGCGCTGTTCTGGCAGCTGCCACAGCCGTGGCTGGGCGAGTCGGCCAGCGTGGCCTACCCACAGCAGATGC
AGATCAGCAACGGCAAGCGCCACCCACGCCGCGCGCCCAAGCCTCGTGGCGAGGTGTACCGGCGCTTCGATACGCGCCTG
GGCAGTTGGGTATCGCTGCGTACCTTGGAGATCGAGCATGACCTGGAGCGCTTCAACCGCTGGCAGAACAACCCGCGGGT
GGAGGCGTTCTGGCAGGAGGGTGGCACCCTTGCGCAGCATCGCGAATACCTGGGCAAGCTCGAGGCCGATCCGCATGCCC
TGACGCTGATCGGTTGCTTCGATGACCAGCCGTTTGCCTACTTCGAGGCGTACTGGGCCAAGGAAGACCGCATTGCGCCG
TTCTACCCGGCCGATGACTACGACCGTGGCATCCATATGCTGGTGGGGGAGGAGAGCCACCGCGGGCCGCACAAGGTGGC
CAGCTGGCTATCGGCGCTGGTGCACTACCTGTTCCTGGATGACCCGCGCACCCAGCGGGTGGTGGCCGAGCCGCGTGCCG
ACAACGGCAAGATGATCGGCTACATGCACGACCAGTGCTTCCATTGCGACAAGGAGTTCGACTTCCCGCACAAGCGTGCG
GCGTTGATGATTCTGGGGCGGGAACGGTTTTTCGATCGTTGCAAACTGGCTTGA

Protein sequence :
MPFDAASQPQSAPRWRSLSAEEGDSWLSLSLEGRALIQLRLEMGATLHVHLERLCPERPYVALWAACYWLLARDAACQRL
AWHLPEPLPQALTSGLLLAGEQPGQYLCERALFWQLPQPWLGESASVAYPQQMQISNGKRHPRRAPKPRGEVYRRFDTRL
GSWVSLRTLEIEHDLERFNRWQNNPRVEAFWQEGGTLAQHREYLGKLEADPHALTLIGCFDDQPFAYFEAYWAKEDRIAP
FYPADDYDRGIHMLVGEESHRGPHKVASWLSALVHYLFLDDPRTQRVVAEPRADNGKMIGYMHDQCFHCDKEFDFPHKRA
ALMILGRERFFDRCKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 1e-50 46
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 7e-51 46
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 7e-51 46
iucB AAD44747.1 IucB Virulence SHI-2 Protein 6e-51 46
iucB AAK71632.1 IucB Virulence SHI-3 Protein 5e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_18085 YP_007230452.1 siderophore biosynthesis protein VFG0616 Protein 3e-51 46
B479_18085 YP_007230452.1 siderophore biosynthesis protein VFG1082 Protein 3e-51 46
B479_18085 YP_007230452.1 siderophore biosynthesis protein VFG0939 Protein 5e-51 46