Gene Information

Name : B479_18005 (B479_18005)
Accession : YP_007230436.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3963736 - 3964419 bp
Length : 684 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCGCCGGCATCTGCGCCGGCCTTACCGCCCAGGGCCTGACCGT
GGACCGTGTGGGCAACGCCGCCGATGCACGGGCGATGCTGCAGGCCGCGCAGTTCGACGTGATGATCCTCGACCTTGGCC
TGCCCGACGAAGACGGCCTGAAGCTGTTGCGCCGCCTGCGCGAGAAAGGCGAGACGCTGCCAGTGCTGGTGCTCACTGCC
CGAGATGCGGTCACCGACCGGGTCGATGGCCTGCAGGCCGGCGCCGACGATTACCTGCTCAAGCCGTTCGACCTGCGCGA
GCTGGCTGCTCGCCTGCACACCCTGCTGCGGAGGGTGGCCGGGCGGGCGGTGAATGTGATCGAACACGGCCCGCTGCGCT
ATGACCCGAGCAGCTGCGAGGCAACCCTGGCCGGCCAGCCGGTCGACCTGTCCCGGCGTGAACAGGCATTGCTCCAGGCG
CTGCTGCAGAACCCCGGGCGGGTGCTGTCCAGCGAGCAGCTCAAAGACTGCGTGTACGGCTTCAGCGACGAAGTCGAGAG
CAATGCCCTGAACGTGCATATCCACCATCTGCGGCGCAAGCTGGGCAACGGCATCGTCGAGACCGTGCGCGGCCTGGGCT
ACCGGCTGGGCCCGGCGCAGGCGCCGGAGCAGGCCGCATCATGA

Protein sequence : 
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAADARAMLQAAQFDVMILDLGLPDEDGLKLLRRLREKGETLPVLVLTA
RDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEATLAGQPVDLSRREQALLQA
LLQNPGRVLSSEQLKDCVYGFSDEVESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPAQAPEQAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-49 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_18005 YP_007230436.1 two component transcriptional regulator BAC0487 Protein 1e-26 43
B479_18005 YP_007230436.1 two component transcriptional regulator CP000647.1.gene1136. Protein 2e-20 41
B479_18005 YP_007230436.1 two component transcriptional regulator NC_002516.2.879194.p Protein 4e-24 41
B479_18005 YP_007230436.1 two component transcriptional regulator BAC0530 Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_18005 YP_007230436.1 two component transcriptional regulator VFG1389 Protein 4e-21 44
B479_18005 YP_007230436.1 two component transcriptional regulator VFG0473 Protein 3e-30 43