Gene Information

Name : B479_17710 (B479_17710)
Accession : YP_007230377.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3893391 - 3894086 bp
Length : 696 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGAGTCAGTCCGCCACCCTCCTGGTCATCGACGATGAACCGCAGATCCGCAAGTTCCTGCGCATCAGCCTGGCCTCGCA
AGGCTACAAGGTGCTCGAGGCCGCCACCGGCGCGGAAGGGTTGGCCCAGGCGGCGCTGGGCAAGCCGGACCTGGTGGTAC
TCGACCTGGGCCTGCCGGACATGGACGGCCAGCAGGTACTGCGTGACCTGCGCGAATGGAGCGCGGTGCCGGTGCTGGTG
TTGTCGGTGCGCGCGAGTGAAGTGCAGAAGGTCGATGCGCTGGATGGTGGAGCCAACGACTATGTGACCAAGCCGTTCGG
CATCCAGGAGTTTCTGGCGCGGGTGCGTGCCTTGCTGCGCCAGGTGCCGCAGGCCGGTGGCTCGGAAGTGGCGGCCAGCT
TTGGGCCGCTGATGGTGGACTTTGCCTTTCGCCGGGTGACCCTGGATGGCGTGGAAGTGGCGCTGACCCGCAAGGAGTAT
GCGTTGCTGGCGCAACTGGCCGGGCACCCGGGGCGGGTGATTACCCAGCAGCAACTGCTCAAGGATATCTGGGGGCCTAC
CCATGTGGATGACACCCATTACCTGCGGATAGTGGTCGGGCATCTGCGGCAGAAGTTGGGAGATGACCCCACGGCGCCGC
GGTTCATCATCACCGAGCCAGGGGTGGGATACAGGTTGGTGGCGCCCACCATGTAA

Protein sequence :
MSQSATLLVIDDEPQIRKFLRISLASQGYKVLEAATGAEGLAQAALGKPDLVVLDLGLPDMDGQQVLRDLREWSAVPVLV
LSVRASEVQKVDALDGGANDYVTKPFGIQEFLARVRALLRQVPQAGGSEVAASFGPLMVDFAFRRVTLDGVEVALTRKEY
ALLAQLAGHPGRVITQQQLLKDIWGPTHVDDTHYLRIVVGHLRQKLGDDPTAPRFIITEPGVGYRLVAPTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-28 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_17710 YP_007230377.1 two component transcriptional regulator VFG1390 Protein 2e-27 41