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Name : B479_17665 (B479_17665) Accession : YP_007230368.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 3880102 - 3881715 bp Length : 1614 bp Strand : + Note : COG4172 ABC-type uncharacterized transport system, duplicated ATPase component DNA sequence : ATGAGTGAACAGAACCTGATCGAAGTGCGCGACCTGGCGGTGGAGTTCGTCACCGGTGACCAGGCCCACCGCGTTGTGAA CGGCATCAGCTTCGACATCCGCAAGGGTGAGACGCTGGCACTGGTGGGCGAGAGTGGCTCGGGCAAATCGGTCACCGCGC ACTCGCTCCTGCGCCTGCTGCCCACCCCCCTGGCCCGCCACCCCAGCGGCAGCATCCGCTACGAGGGCAAGGACCTGCTG CAGCAGAACGAGAAGACCATGCAGCGCATTCGCGGCAACCGCATTGCAATGATCTTCCAGGAGCCGATGACCTCGCTGAA CCCGTTGCACTGCATCGAGAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACCGGCAAGGAGGCCACGGCGC GCACCCTGGAGCTGTTGGAGATGGTCGGCATTCCCGAGCCACGCAAGCGCCTGAAGGCCTTGCCCCATGAGCTGTCGGGC GGGCAGCGCCAGCGGGTGATGATCGCCATGGCCCTGGCCAACGAGCCGGAACTGCTGATTGCGGATGAGCCAACCACGGC GCTGGACGTGACTGTGCAGTTGAAGATTCTCGAACTGCTCAAGGAACTGCAGGCGCGTCTGGGCATGGCCCTGCTGCTGA TCAGCCATGACCTGAACCTGGTGCGACGCATCGCCCACCGTGTGTGCGTGATGCAGCACGGGCAGATTGTCGAGCAGGCC GAATGCGCCAGGTTGTTCAGCGCACCGCAGCACCACTACACGCAGATGCTGATCAATGCCGAACCCAGCGGGCTGCCGGC GCACAACCCGGTGGGCGCGCCATTGCTGGAGGTGGATGACCTCAAGGTGTGGTTCCCGATCAAGAAGGGCCTGCTACGGC GCACGGTCGACCATGTGAAGGCGGTGGACGGGATCAACTTCAGCTTGCCGCAAGGGCAGACGCTGGGGATTGTCGGCGAG TCCGGGTCGGGCAAGTCGACTTTGGGCCTGGCGATCTTGCGGCTGATCTCCAGCCAGGGCGGCATTCGCTTTCATGGGCA GAACCTGGAAGGGCTGAACCAGAAGGCCGTGCGCCCGTTGCGGCGCGAGATGCAGGTAGTGTTCCAGGACCCGTTCGGCA GCCTGAGCCCACGCATGTGCGTGGAGGATATCGTCGGTGAAGGGTTGCGCATTCACCGCATTGGCACGGCGCAGGAACAG GAAGCAGCGATTATTGCGGCCCTGGAGGAAGTCGGGCTGGACCCACGCACACGGCATCGCTATCCGCACGAGTTTTCCGG TGGGCAGCGCCAGCGCATTGCCATTGCCCGGGCGTTGGTATTGAAGCCGGCGCTGATCCTGCTGGATGAACCTACGTCGG CGCTGGACCGCACGGTGCAGCGGCAGGTAGTGGAATTGCTGCGCAATCTGCAGCAGAAATACAACCTGACCTACCTGTTC ATCAGCCATGACCTGGCGGTGGTCAAGGCGTTGAGCCACCAGTTGATGGTGATCAAGCATGGGCATGTGGTGGAGCAAGG GGATGCACAGGCGATCTTCCATGCGCCGCAGCATCCGTATACCCGGCAGTTGCTGGAGGCGGCGTTCTTGGAAGTTGAGG CAGGTTCGCCTTAA Protein sequence : MSEQNLIEVRDLAVEFVTGDQAHRVVNGISFDIRKGETLALVGESGSGKSVTAHSLLRLLPTPLARHPSGSIRYEGKDLL QQNEKTMQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLEMVGIPEPRKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQHGQIVEQA ECARLFSAPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGLLRRTVDHVKAVDGINFSLPQGQTLGIVGE SGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVEDIVGEGLRIHRIGTAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF ISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVEAGSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-75 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-95 | 42 |
