Gene Information

Name : B479_17415 (B479_17415)
Accession : YP_007230318.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3827580 - 3828218 bp
Length : 639 bp
Strand : -
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
TTGATTAGGGTCTTAGTGGTCGACGATCACGATCTGGTACGAACCGGTATTACACGCATGCTGGCCGACATCGATGGCCT
GCAGGTGGTGGGTGAGGGCGATTCGGGCGAGTCGGCACTCAGGCTGGCCCGTGAACTGAAGCCGGATGTGGTGCTGATGG
ATGTGAAAATGCCCGGCATCGGCGGCCTGGAGGCCACCCGCAAGCTGCTGCGCAGCCACCCGGACATCAAGGTGGTTGCC
GTGACCGTGTGCGAGGAAGACCCGTTCCCCACGCGCCTGTTGCAGGCCGGCGCTGCTGGCTACCTGACCAAGGGCGCCGG
CCTTGACGAAATGGTCCAGGCCATCCGCCTGGCCTTCGCCGGCCAGCGCTACATCAGCCCGCAGATTGCCCAGCAGATGG
CGCTGAAGCCATTCCAGCCACAGGGCTCGCCGTTCGATGCCTTGTCGGAGCGGGAAATCCAGATTGCCCTGATGATCGTC
GGCTGCCAGAAAGTGCAGATCATCTCCGACAAGTTGTGCCTCTCGCCCAAGACCGTCAATACTTACCGTTATCGGATCTT
TGAAAAACTCTCGGTCACCAGCGACGTCGAACTGACGTTGCTGGCCGTTCGCCACGGCATGGTCGACGCAAGCCTGTAA

Protein sequence :
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGEGDSGESALRLARELKPDVVLMDVKMPGIGGLEATRKLLRSHPDIKVVA
VTVCEEDPFPTRLLQAGAAGYLTKGAGLDEMVQAIRLAFAGQRYISPQIAQQMALKPFQPQGSPFDALSEREIQIALMIV
GCQKVQIISDKLCLSPKTVNTYRYRIFEKLSVTSDVELTLLAVRHGMVDASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 4e-50 54
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 4e-50 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_17415 YP_007230318.1 two component LuxR family transcriptional regulator VFG1889 Protein 9e-50 54