Gene Information

Name : B479_17370 (B479_17370)
Accession : YP_007230309.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3817596 - 3819086 bp
Length : 1491 bp
Strand : +
Note : COG3517 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGCCAAAGCAAAACAGCACGACCGTCGCGGTTGAAACAACAACCGAACCACTGAGCAACGCCACCCTGCTCGACCAGAT
CATGGCAGAAACCAAGTTGGCACCTACTCAAGAGGGCTATCAAGTCGCTCGCCAGGGTGTATCTGCTTTTATTGCCGAGA
TCCTTAAAAGCCATGACCCTGATCAACTCATCAACAAACATCGTGTCGACCAGATGATCGCTGAACTGGATCGAGTGCTC
AGCAAGCAGATGGATGCCATCCTGCATCAACCCAAGTTTCAGCAACTTGAATCCGCGTGGCGCAGCCTCAAACTTTTGGT
CGACCGAACCGACTTTCGTGAGAACATCAAGCTTGAAGTCTTGCATGTCAGCAAAGATGACTTGCTCGATGACTTCGAGA
ATGCCGCCGACATCACTTGCAGCGGCATATACAAGCATGTTTACACCGCAGGTTATGGCCAATTTGGTGGTGAACCCGTT
GCTGCGATGGTTGGCAACTACAGCTTCGGCCCCTCTTCTCCCGATATAAAACTGCTGAGTTACATGGCCTCGGTCGGTGC
CATGGCACACGCACCTTTTCTCGCGGCGCCCTCTCCTGAGTTCTTCAATCTGAGCAGCTTTGAAGAACTGCCCAATCTGA
AGGAGATCAAGGACATTTTCGCCGGCCCCCGGCATGCCAAGTGGCGTGCGTTCCGCGAAAGCGAGGATGCCCGTCATACC
GGGCTGACCGGGCCGCGATTCATGCTCCGCTCTGCCTATCACCCGCAAGAAAACCCGGTCCAGAGCTTCACCTACGACGA
GGACATCGCCGGGCAGCACGACAACTATCTGTGGGGCAACTCCGCCTTCCTGCTGGCCAGCTGCATCAATGACAGCTTTG
CCCGCTACCGCTGGTGCCCGAACATCATCGGCCCGCAGTCGGGTGGTGCCGTCGAGGACCTGCCGGTGCACCTGTACGAG
TCACTGGGTCAGCTGCAGGCCAAGATTCCGACCGAAGTCCTGATCTCCGACCGCAAGGAGTTCGAGCTGGCCGAAGAGGG
CTTCATCGCCCTGACCATGCGCAAGGACAGCGACAACGCCGCGTTCTTCTCGGCCAACTCGGTACAGAAGCCGAAGAACT
TCCCCAAGACCCCGGAAGGCCTGCAAGCGCAAACCAACTACAAGCTCGGCACCCAGCTGCCCTACCTGTTCATCGTCAAC
CGGCTGGCCCACTACATCAAGGTGCTGCAGCGCGAACAGATCGGTAGCTGGAAAGAGCGCAAGGACCTTGAGTCCGAACT
GAACAAATGGATCAGGCAGTACGTGGCCGACCAGGAGAACCCGTCAGCCGATGTGCGCAGCCGCCGCCCGTTGCGTGCTG
CAAGGGTCGAGGTGTCGGACGTTGCCGGTGACCCGGGTTGGTATCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTAC
ATGGGGGCGAATTTCGAGATCTCCCTGGTCGGCCGGCTTGATACCCAATGA

Protein sequence :
MPKQNSTTVAVETTTEPLSNATLLDQIMAETKLAPTQEGYQVARQGVSAFIAEILKSHDPDQLINKHRVDQMIAELDRVL
SKQMDAILHQPKFQQLESAWRSLKLLVDRTDFRENIKLEVLHVSKDDLLDDFENAADITCSGIYKHVYTAGYGQFGGEPV
AAMVGNYSFGPSSPDIKLLSYMASVGAMAHAPFLAAPSPEFFNLSSFEELPNLKEIKDIFAGPRHAKWRAFRESEDARHT
GLTGPRFMLRSAYHPQENPVQSFTYDEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVHLYE
SLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKNFPKTPEGLQAQTNYKLGTQLPYLFIVN
RLAHYIKVLQREQIGSWKERKDLESELNKWIRQYVADQENPSADVRSRRPLRAARVEVSDVAGDPGWYQVSLAVRPHFKY
MGANFEISLVGRLDTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-171 66
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-171 66
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 2e-153 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_17370 YP_007230309.1 hypothetical protein VFG2093 Protein 0.0 70
B479_17370 YP_007230309.1 hypothetical protein VFG2475 Protein 4e-160 60
B479_17370 YP_007230309.1 hypothetical protein VFG2070 Protein 1e-83 41