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Name : B479_17060 (B479_17060) Accession : YP_007230247.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 3736698 - 3738653 bp Length : 1956 bp Strand : + Note : COG0550 Topoisomerase IA DNA sequence : ATGCGCCTGTTCCTCTGCGAAAAACCCTCCCAGGCAAAAGACATCGCCAAAGTGCTCGGCGCCAACCGCAAGGGCGATGG CTGCTGGCAAGGCACCGACGTCTGCGTGACTTGGTGCATCGGCCACCTGCTGGAAACCGCCCCGCCCGACAGCTACGACG AACGCTACAAGCGCTGGAACCTGGCCGACCTGCCGATCATCCCGGAAAAGTGGAAAATGCTGGTCAAGCCCAAGACCGCC AGCCAGTTCAAGGCAGTCAAGCGCCTGCTCGGCGAAGCACGCGAACTGGTGATCGCCACCGACGCCGACCGCGAAGGCGA AATGATCGCCCGCGAACTGGTCGAGCATTGCCGCTACCGCGGCCCGGTGCAGCGCCTGTGGCTGTCGGCACTGGACGACG CCTCCATTCGCAAGGCCCTGGCGCGGCTGCTGCCGGGCCACGAAACCTTCAACCTGTACCACTCGGCGTTGGGCCGTTCG CGCGCAGACTGGCTGATCGGCATGAACATGAGCCGGCTGTTCACCCTGCTGGGCCGCCAGTCGGGCTATCAGGGCGTGCT GCCGGTGGGCCGGGTGCAAACGCCCACCCTGCGCCTGGTGGTCGACCGCGACCGCAGCATCGCCGACTTTGTGCCGGTAC CGTTCTGGGCCATCGACGTGCAGCTCGAACACGCAGGCTTTGGCTTCAACGCCCAGTGGCGCGCCCCCGATGACGCCTGC GACGACCAGGGCCGCTGCCTGAACCAGGCCCTGGCGCAGCAGGCTGCCGCCGACATCGGCAATGCGGGTACTGCCCGGGC CGTGAAGGTGACCACCGAACGCGTGCGTGAAGCGGCACCCCTGCCCTTCGACCTTGGCACCCTGCAGGAGCTGTGCTCGA AAAAGTTCGGCCTCGGCGCCCAGGAAACCCTCGACATCGCCCAGGCCCTGTACGAGACCCACAAGCTGATCACCTACCCG CGCAGCGACTGCGGCTACCTGCCGCAAAGCCAGCACGCCGAAGCGCCAGCCATCCTCGCCGCCCTGCAACGTTCCGATGC CAGCCTGGCGCCGCTGCAGCCCTACCTGGAGCCGCAACGCCGCTCACGGGCGTGGAACGACGCCAAGGTCAGCGCCCACC ACGGCATCATCCCCACTGCCGCTGCCAGCGACCCGTCGCGCCTGCCAGCCAAGCACAAGGCGGTGTACACCCTGATCCGC GCCCGCTACCTTGCGCAGTTCCTGCCCAATCACGAGTACGACCGTACCCAGGCCGACTTCGACTGCGCTGGCCATGCCCT GCGTGCCGTAGGCAAGCAGATAGTCGAACCAGGCTGGCGCCGTGCGCTGCCCGAGGCGCTGACCCCGGCCAAGGGCCGCG AGGCACCACCGGCCCAGGTGCTGCCGGCGCTGCGCGAAGGCCAGGACTGCACGGTGCAGGGCCTGCAACTGAAAGACCTG TGGACCCAGCCGCCCAAGCCGTTTACCGAAGGCGACCTGATCAAGGCAATGAAGAACGTGGCCAAGCTGGTGGACGACCC GCGGTTGAAGCAGAAGCTGAAGGAAACCACCGGTATCGGCACCGAAGCCACCCGCGCCAGCATCATCCAGGGCCTGCTTG ACCGCGGCTACCTGGTGAAGAACGGCAAGGCGCTGTCCGCCACCCCTGCGGCCTTCAGCCTGATCGACGCCGTACCTCGC GCCATTGCCGACCCTGGTACCACAGCTATCTGGGAGCAGGCGCTGGACATGGTGCAGAGTGGCGAGATGACGCTGGAAGA GTTCGTCGCCCGGCAGTCGGCATGGATGGGCAAGCTGGTCGAACGGTGCAGCGGCATGCGCATGACCATCAGCGGGCCGG CAGCCGGGGCTGCGCCGCCGTGGAAGAAAAAGCGTAGAGGGAGTGGGAAGAGTAAAGCGGCTGGAAGCAAGGCTGCCAGC AAGCCGCGGCAGCCCAAGAGAAAAGCTTCAACCTGA Protein sequence : MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWNLADLPIIPEKWKMLVKPKTA SQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYRGPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRS RADWLIGMNMSRLFTLLGRQSGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIDVQLEHAGFGFNAQWRAPDDAC DDQGRCLNQALAQQAAADIGNAGTARAVKVTTERVREAAPLPFDLGTLQELCSKKFGLGAQETLDIAQALYETHKLITYP RSDCGYLPQSQHAEAPAILAALQRSDASLAPLQPYLEPQRRSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIR ARYLAQFLPNHEYDRTQADFDCAGHALRAVGKQIVEPGWRRALPEALTPAKGREAPPAQVLPALREGQDCTVQGLQLKDL WTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLDRGYLVKNGKALSATPAAFSLIDAVPR AIADPGTTAIWEQALDMVQSGEMTLEEFVARQSAWMGKLVERCSGMRMTISGPAAGAAPPWKKKRRGSGKSKAAGSKAAS KPRQPKRKAST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 66 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 64 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 63 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 3e-148 | 51 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 6e-150 | 50 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 8e-150 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 8e-150 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 2e-150 | 50 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 8e-118 | 43 |
