Gene Information

Name : B479_16730 (B479_16730)
Accession : YP_007230181.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : putative capsid scafolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3676794 - 3677648 bp
Length : 855 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGACAGCACCAAAGCCCCAGCCAAGAAGTTCCGCTCCAAATGGACCCGCATCGCCGTCGAAGGCGCGACCACCGA
TGGCCGCAACATTGAGCGCAGCTGGATTGAGGACATGGCCAGCACCTACAGCCCCAACACCTACGGTGCCCGCATCAACT
GCGAACACATCAAGTGGGCCTGGCCAGGTGGCGAGTTCGGCGCTTATGGCGATGTCTTCTCGCTGAAAGCCGAAGAAGTC
GAAATCAACAAAGTGAAAAAGCTGGCCCTCTTCGCCCAGCTGGAGCCGAACGACGCGCTGATCGCCCTCAACAAGGCGGG
CCAGAAGGTTTACACCTCGATCGAGGTTGATCCGAAGTTTGCCGACACCGGCAAAGCCTACCTGGTTGGCCTCGCGGTAA
CTGACACCCCTGCCAGCCTCGGTACCGAAGCACTGTCATTCAGCGCTCAGCACGGCTCGCTGGCCAGCCGCAAAACCAGC
AAGGACAACCTCTTCTCGGCAGCGGAAGAGACCACCTTCGAATTCGAAGAGATCACTGACACCCCCAGCGTGTTCGCCTC
GCTGGGCAAGAAGGTCAGTGAGCTCCTCGGCAAGAGCAAGGATAAGGAAGGCAAGGACGCCGCCAGTTTTGCCGCCCTGG
GCGAGATGATCGAACAGATCGCCACCCATGGCGCCGAGCAGGCCGAAGCCTTCAGCGCGGAAAAAGCCGCGCGCGAAAAG
CTCCAGGCCGACCACGACAAGCTTTCCAAGGACTTCAACGAGCTGGTCAAGCGCCTGGGCGAAACCGAAGACCACTCCCA
GGCGCAGCGTCCACCAGTGACCGGTGGCGACGGGCAGGTCCTAGCCGAGTACTGA

Protein sequence :
MSDSTKAPAKKFRSKWTRIAVEGATTDGRNIERSWIEDMASTYSPNTYGARINCEHIKWAWPGGEFGAYGDVFSLKAEEV
EINKVKKLALFAQLEPNDALIALNKAGQKVYTSIEVDPKFADTGKAYLVGLAVTDTPASLGTEALSFSAQHGSLASRKTS
KDNLFSAAEETTFEFEEITDTPSVFASLGKKVSELLGKSKDKEGKDAASFAALGEMIEQIATHGAEQAEAFSAEKAAREK
LQADHDKLSKDFNELVKRLGETEDHSQAQRPPVTGGDGQVLAEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 1e-78 66
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 7e-42 45
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 7e-42 45