|
Name : ssuB (B479_01635) Accession : YP_007227186.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Resistance Product : aliphatic sulfonates transport ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 387784 - 388596 bp Length : 813 bp Strand : + Note : COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component DNA sequence : ATGACCGTACTCAAGGAACAGCCGCCACGCCTGCTGCGTGGCATCCCGCTGGCTTCCAGCGGCCTGCGCAAGACCTTTGG CCAGCGCGAAGTGCTGAAGGGGATCGAGCTGCATATTCCTGCCGGCCAGTTCGTCGCGATCGTCGGCCGTAGTGGCTGCG GCAAGAGCACCTTGCTGCGCCTGCTGGCCGGTCTCGACCAGCCCACTGCAGGCCAGTTGCTGGCCGGTGCCGCGCCGCTG GAACAGGCCCGCGAAGAAACCCGCCTGATGTTCCAGGACGCGCGCCTGCTGCCATGGAAGAAGGTGATCGACAACGTTGG CCTGGGCCTGTCTGGCGACTGGCGCCCGCGTGCGCTGGAAGCGTTGGAGTCCGTTGGCCTGGCCGATCGCGCCAATGAAT GGCCGGCGGCTCTGTCGGGTGGCCAGAAGCAGCGTGTGGCCCTGGCCCGGGCGCTGATTCACCAGCCGCGCCTGCTGCTG CTGGACGAGCCGCTCGGTGCACTGGATGCATTGACCCGTATCGAGATGCAGCAACTGATCGAACGCCTGTGGCGTCAGCA CGGCTTCACCGTGTTGCTGGTTACCCACGATGTCAGCGAGGCAGTCGCCGTGGCTGACCGGGTGATCCTGATCGAGGACG GCGAAGTCGGGCTCGACCTCACTGTCGACCTGGCACGGCCTCGGGCGCGTGGTTCGCACCGCCTGGCCGCGCTGGAAAGC GAAGTGCTCAACCGTGTTCTGTCGGCCCCGGGCGCTGCGCCCGAGCCGGATCCTGTAGCCCCTTTGCCCACGCAACTGCG TTGGGCGCACTGA Protein sequence : MTVLKEQPPRLLRGIPLASSGLRKTFGQREVLKGIELHIPAGQFVAIVGRSGCGKSTLLRLLAGLDQPTAGQLLAGAAPL EQAREETRLMFQDARLLPWKKVIDNVGLGLSGDWRPRALEALESVGLADRANEWPAALSGGQKQRVALARALIHQPRLLL LDEPLGALDALTRIEMQQLIERLWRQHGFTVLLVTHDVSEAVAVADRVILIEDGEVGLDLTVDLARPRARGSHRLAALES EVLNRVLSAPGAAPEPDPVAPLPTQLRWAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 5e-37 | 47 |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-21 | 43 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-23 | 42 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-23 | 42 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-23 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssuB | YP_007227186.1 | aliphatic sulfonates transport ATP-binding subunit | NC_012469.1.7686878. | Protein | 2e-21 | 41 |
| ssuB | YP_007227186.1 | aliphatic sulfonates transport ATP-binding subunit | NC_008702.1.4606598. | Protein | 9e-16 | 41 |
