Gene Information

Name : B479_15895 (B479_15895)
Accession : YP_007230014.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3525241 - 3525909 bp
Length : 669 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGCTGGTCATCGAGCAACTGCACAAATCATTCCCCACCCCCCTGGGCCCGCTCCCCGTGCTGCTGGGCGTCGACCTGCG
CCTGGCGCGCGGCAGCAGCCTGGCGCTGATGGGCGAGTCGGGCAGCGGCAAGAGCACCTTGCTGCACCTGGTGGCCGGCC
TGGACCGTGCCGACAGTGGCCGCATCCTGATCGACGATACCCCGCTCGACAGCCGTTCCGAGGCGTCGCTGGCGTTGTGG
CGGCGGGAGGGCATAGGCCTGGTGTTCCAGCAGTACAACCTGATCAGCAGCCTGGACGTGGGGGCCAATCTCGCGTTCCA
GGCGCGGCTGGCCGGTCGGCATGATCCCGATTGGCTGGCCTATCTGGCGCAGCGCCTGGGTTTGGCGGATTTGCTGGCGC
GTTACCCGGAGCAATTGTCTGGTGGCCAGCAACAGCGGGTTGCCATCGGCCGCGCCCTGGCCGGGCGCCCGGCCTGGTTG
CTGGCCGACGAACCCACCGGCAGCCTCGATGAAACCAGCAGCGATGAGGTGTTGAGCCTGCTGTTGCAGCTGGTCGCCGA
GGCTGGCAGTGGGGTGCTGATGGTGACCCACAGCCCGCGGTTGGCGGCGCGCTTGCAACAGCGTTGTTACCTGCAGGCCG
GCCGTGTGCGGCCCGAGCAGGGCGGATGA

Protein sequence : 
MLVIEQLHKSFPTPLGPLPVLLGVDLRLARGSSLALMGESGSGKSTLLHLVAGLDRADSGRILIDDTPLDSRSEASLALW
RREGIGLVFQQYNLISSLDVGANLAFQARLAGRHDPDWLAYLAQRLGLADLLARYPEQLSGGQQQRVAIGRALAGRPAWL
LADEPTGSLDETSSDEVLSLLLQLVAEAGSGVLMVTHSPRLAARLQQRCYLQAGRVRPEQGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-24 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_15895 YP_007230014.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-32 46
B479_15895 YP_007230014.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-30 41
B479_15895 YP_007230014.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-21 41
B479_15895 YP_007230014.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_15895 YP_007230014.1 ABC transporter ATP-binding protein VFG2059 Protein 5e-16 41