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Name : gabD (B479_01495) Accession : YP_007227160.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 356114 - 357556 bp Length : 1443 bp Strand : + Note : COG1012 NAD-dependent aldehyde dehydrogenases DNA sequence : ATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTACATCAATGGTGAGTGGCTGGATGCGGACAACGGCCAGAC CATCAAGGTCACCAACCCGGCCACTGGTGAAGTCATCGGTACCGTGCCGAAGATGGGCACCGCGGAAACCCGCCGCGCCA TCGAAGCCGCCGACAAGGCTCTGCCGGCCTGGCGTGCCCTGACCGCCAAGGAGCGTTCGGCCAAGCTGCGTCGCTGGTTC GAACTGATGATCGAGAACCAGGACGACCTGGCTCGCCTGATGACCACCGAACAAGGCAAGCCGCTGGCCGAAGCCAAGGG CGAAATCGCCTATGCTGCCTCGTTCATCGAGTGGTTCGCCGAGGAAGCCAAGCGTGTCTACGGTGACACCATCCCGGGCC ACCAGCCAGACAAGCGCCTGATCGTCATCAAGCAGCCAATCGGTGTTACCGCGGCCATCACCCCGTGGAACTTCCCGGCC GCCATGATCACCCGTAAAGCCGGCCCGGCCCTGGCCGCCGGCTGCACCATGGTGCTCAAGCCTGCCTCGCAGACCCCATA CTCCGCCCTGGCCCTGGTCGAGCTGGCCCACCGTGCCGGCATCCCGGCTGGCGTGCTGAGCGTGGTTACCGGCAGCGCTG GCGAAGTTGGCGGTGAACTGACCGGCAACTCCCTGGTCCGCAAGCTGTCCTTCACCGGCTCGACCGAAATCGGTCGCCAG CTGATGGAAGAATGCGCCAAGGACATCAAGAAGGTTTCCCTGGAGCTGGGTGGCAACGCCCCGTTCATCGTGTTCGACGA CGCCGACCTGGACAAGGCGGTCGAGGGCGCGATCATCTCCAAGTACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACC GTATCTACGTGCAGGACGGCGTCTACGACGCGTTCGCCCAGAAGCTGGCCGCCGCTGTTGCCAAGCTGAAGATCGGTAAC GGCCTGGAAGAAGGCACCACCACTGGCCCGCTGATCGACGGCAAGGCTGTCGCCAAGGTCCAGGAACACATCGAAGACGC CGTTGGCAAAGGCGCCAAGGTACTGTCCGGTGGCAAGATCATCGAAGGCAACTTCTTCGAGCCGACCATTCTGGTCGACG TACCGAAGACCGCTGCCGTCGCCAAGGAAGAGACCTTCGGCCCGCTGGCGCCGCTGTTCCGCTTCAAGGACGAGGCCGAA GTGATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCCTCGTACTTCTACGCCCGCGACATGAGCCGTGTGTTCCGTGT TGCCGAAGCCCTGGAATACGGCATGGTAGGTATCAACACCGGCCTGATCTCCAATGAAGTGGCACCGTTCGGTGGCATCA AGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTC TGA Protein sequence : MQLKDAQLFRQQAYINGEWLDADNGQTIKVTNPATGEVIGTVPKMGTAETRRAIEAADKALPAWRALTAKERSAKLRRWF ELMIENQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFAEEAKRVYGDTIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPYSALALVELAHRAGIPAGVLSVVTGSAGEVGGELTGNSLVRKLSFTGSTEIGRQ LMEECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDGVYDAFAQKLAAAVAKLKIGN GLEEGTTTGPLIDGKAVAKVQEHIEDAVGKGAKVLSGGKIIEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAE VIAMSNDTEFGLASYFYARDMSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCISV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-155 | 68 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 2e-68 | 41 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-85 | 41 |
