Gene Information

Name : B479_14940 (B479_14940)
Accession : YP_007229825.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3304475 - 3305155 bp
Length : 681 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCCTCGCGTACTGACTATCGAAGACGACGCCGTCACCGGCCAGGAAATCGTCGCCGAACTTACCAGCCACGGCCTTGA
GGTGGATTGGGCCGACAATGGCCGTGAAGGCCTGGCCAAGGCCATTGCCGGCGGCTACGACCTGATCACCCTGGACCGCA
TGCTGCCCGAGGTCGATGGCCTGACCATCGTCACCACGCTGCGCAACCTCAAGATTGCCACGCCGATCCTGATGATCAGC
GCCCTCTCCGACGTCGACGAGCGGGTGCGCGGCCTGCGTGCCGGGGGTGACGACTACCTGACCAAACCGTTCGCCTCCGA
CGAGATGGCCGCGCGGGTCGAAGTGCTGCTGCGCCGCAACAGCGTACCCATGACCCAGACCCGCCTTCAGGTCGCCGACC
TGCAACTGGACCTGATCAGCCACGAAGCCCGCCGTGGCGAACAGACCCTCAACCTGCTGCCCACCGAATACAAGCTGCTG
GAGTACCTGATGCGCCATAGCGGCCAGGTGATCACCCGGATGATGATTTTCGAGGAAGTCTGGGGCTACCACTTCGACCC
GGGCACCAACCTGATCGACGTACACATCGGTCGCCTGCGCAAGAAAATCGACTCGCCCGGCCAGTCGCCGCTGATCCGTA
CGGTACGGGGCTCCGGCTATGCCATTGCTGAACCCGTCTAA

Protein sequence : 
MPRVLTIEDDAVTGQEIVAELTSHGLEVDWADNGREGLAKAIAGGYDLITLDRMLPEVDGLTIVTTLRNLKIATPILMIS
ALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRNSVPMTQTRLQVADLQLDLISHEARRGEQTLNLLPTEYKLL
EYLMRHSGQVITRMMIFEEVWGYHFDPGTNLIDVHIGRLRKKIDSPGQSPLIRTVRGSGYAIAEPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-33 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_14940 YP_007229825.1 two component transcriptional regulator BAC0111 Protein 3e-46 46
B479_14940 YP_007229825.1 two component transcriptional regulator BAC0347 Protein 1e-41 44
B479_14940 YP_007229825.1 two component transcriptional regulator BAC0125 Protein 2e-40 44
B479_14940 YP_007229825.1 two component transcriptional regulator BAC0197 Protein 4e-38 43
B479_14940 YP_007229825.1 two component transcriptional regulator BAC0308 Protein 7e-39 42
B479_14940 YP_007229825.1 two component transcriptional regulator BAC0083 Protein 1e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_14940 YP_007229825.1 two component transcriptional regulator VFG0596 Protein 6e-34 41
B479_14940 YP_007229825.1 two component transcriptional regulator VFG1389 Protein 3e-32 41