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Name : B479_14705 (B479_14705) Accession : YP_007229778.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 3247648 - 3249321 bp Length : 1674 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGCCCGCGAAGAATCCAGCACCATTCTCAGCCTACCCCCGCGACCTGCTGGCCCAGGCCCGCCTGCAAACCAGCGACGA ACGCCTGCTCACCCGCCTGGAACAGCTGGCCTGCGACACCCCCGACACCTTCACCCAGCGCCTGGGCCTGACCCTGCATT ACCCGGTGCTGGACAGCCACACCCTGCTGGCCAGCACCCCACGCTTCGACAAGGTCAGCCTGGCGATGTGCCTGAAGCGT GAATTCGTCCTGATCGAGCAGGGCGGCCAACTGCTGGGCGTGTTCGCCGACCCCTTCGACCACGCCCGCCTGGCCTGGAT CGACGATGTGCTGCAAGGCGCACCGCTGTACCTGGCCCATGCCGCCGACCTTGCCACCTTCCTGGCCCGCCACGAAGAAA GCTTCCACGCCGTGGACGCCCTTGACCACGACGCCGAAACCAGCAGCGAAAGCGACCCGCTGCAGCGCCTGTCGCTGGCC AGCATCAGCGAAGACCAGAGCCGCGTGGTCAAGCTGGTCAACTCCACGCTGTACGACGCCCTCAAGCTGCACGCCAGCGA CATCCACCTGGGCATGACCGGCCAGGGCCTGACCATAAAGTACCGCATCGACGGCGTGCTCAACGGCGCCGGCAAGGCCA GCGGCAGCGCCTTCGCCGACCAGGTGATCTCGCGCATCAAGGTGATGGCCGAGCTGGACATTGGCGAAAAGCGCGTGCCC CAGGACGGCCGTTTCAAGGTTGCCGTGGGCGACCGGCAGATCGACTTCCGGGTATCGATCATGCCCAGCATCTTCGGCGA AGACGCCGTGCTGCGGGTGCTCGACAAGCAGGACCTGTCCGACCGGGTCAGCGGCGTGCAGCTGCAGGCCCTGGGCTTTG CCGAGGAAACCCTGCGCGCCCTGCGCCGCCTGGCCGCCGAACCCTACGGCATGATCCTGGTCACCGGCCCCACCGGCAGC GGCAAGACCACCACCCTGTACGCCATGATCAGCGAGATCAACCACGGCGTGGACAAGATCATCACCATCGAGGACCCGGT CGAATACCAGCTGCCTGGCGTGTTGCAGATCCCGGTCAACGAGAAGAAGGGCCTGACGTTCGCCCGCGGCCTGCGCTCGA TCCTGCGCCACGACCCGGACAAGATCCTGGTCGGTGAAATCCGCGATCCGGACACCGCGCAAATCGCAGTGCAGTCGGCG CTCACCGGCCACCTGGTGTTCACCACCATCCACGCCAACAACGTGTTCGATGTGATCGGCCGTTTCAGCCAGATGCAGGT CGACCCCTACAGCTTCGTCTCCGCGCTCAATGCGGTGCTGGCCCAGCGCCTGATCCGCCTGGCCTGCCCGCACTGCGCGA CGCCGTGCGAAGTCGACGACGACACCCTGTACGGCGCGGGCCTGACCCGCGAGGGCGTGGCCGGCTGGAAATTCGTCCGC GCCCAGGGCTGCGGCCAGTGCCGTGGCAGTGGCTACCGCGGCCGCAGCGCCATCGCCGAACTGCTGCACCTGGACGACGA CCTGCGGCAGATGATCGTCGAGCGTCGCCCTCTGTCGCAAATCAAGAACCTCGCCTGCCAGCGTGGCCTGCGCCTGCTGC GGGCCTCGGCCCTGGACCTGGTCCGGGATGGCCGTACCACACTCGAGGAGATCAACCGTGTCACATTCATTTGA Protein sequence : MPAKNPAPFSAYPRDLLAQARLQTSDERLLTRLEQLACDTPDTFTQRLGLTLHYPVLDSHTLLASTPRFDKVSLAMCLKR EFVLIEQGGQLLGVFADPFDHARLAWIDDVLQGAPLYLAHAADLATFLARHEESFHAVDALDHDAETSSESDPLQRLSLA SISEDQSRVVKLVNSTLYDALKLHASDIHLGMTGQGLTIKYRIDGVLNGAGKASGSAFADQVISRIKVMAELDIGEKRVP QDGRFKVAVGDRQIDFRVSIMPSIFGEDAVLRVLDKQDLSDRVSGVQLQALGFAEETLRALRRLAAEPYGMILVTGPTGS GKTTTLYAMISEINHGVDKIITIEDPVEYQLPGVLQIPVNEKKGLTFARGLRSILRHDPDKILVGEIRDPDTAQIAVQSA LTGHLVFTTIHANNVFDVIGRFSQMQVDPYSFVSALNAVLAQRLIRLACPHCATPCEVDDDTLYGAGLTREGVAGWKFVR AQGCGQCRGSGYRGRSAIAELLHLDDDLRQMIVERRPLSQIKNLACQRGLRLLRASALDLVRDGRTTLEEINRVTFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-75 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-75 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| B479_14705 | YP_007229778.1 | type II secretion system protein E | VFG2048 | Protein | 1e-76 | 45 |
| B479_14705 | YP_007229778.1 | type II secretion system protein E | VFG0182 | Protein | 3e-75 | 45 |
| B479_14705 | YP_007229778.1 | type II secretion system protein E | VFG1880 | Protein | 2e-66 | 42 |
| B479_14705 | YP_007229778.1 | type II secretion system protein E | VFG2426 | Protein | 2e-70 | 41 |
